RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SCOCQ9UIL1 159 aa18.71■□□□□ 0.59
TSPAN4-210ENST00000464987 MAGEA13PA6NCF6 341 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 ACSL4O60488 711 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 RPP40O75818 363 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 ALDH1A1P00352 501 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 SELPP16109 830 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 GNA12Q03113 381 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 OR4D1Q15615 310 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 FBXO48Q5FWF7 155 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 DENND1CQ8IV53 801 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 OR9I1Q8NGQ6 314 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 PRICKLE1Q96MT3 831 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 TUBGCP5Q96RT8 1024 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 SERPINI1Q99574 410 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 ZBED2Q9BTP6 218 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 EML4Q9HC35 981 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 TRAF6Q9Y4K3 522 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 PTGDR2Q9Y5Y4 395 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 UBXN8O00124 270 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 LYNP07948 512 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 SERPINF2P08697 491 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 PTPRRQ15256 657 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 ARMC3Q5W041 872 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 SLC22A9Q8IVM8 553 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 BHLHE22Q8NFJ8 381 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 OR4L1Q8NH43 312 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 CDKN2AIPNLQ96HQ2 116 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 CATSPERZQ9NTU4 200 aa18.7■□□□□ 0.58
TSPAN4-210ENST00000464987 A0A0U1RQS6 177 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 H3BNC9 293 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 ARVCFO00192 962 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 FBP2O00757 339 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 UBDO15205 165 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 ZNF37AP17032 561 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 CDKN1CP49918 316 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 SCNN1BP51168 640 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 SH3BP2P78314 561 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 EGFL6Q8IUX8 553 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 FBXO22Q8NEZ5 403 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 MDGA1Q8NFP4 955 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 PPP2R3CQ969Q6 453 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 NSUN5Q96P11 429 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 CYP2S1Q96SQ9 504 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 MGME1Q9BQP7 344 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 ELAC1Q9H777 363 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 GKN1Q9NS71 199 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 VPS28Q9UK41 221 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 IKZF3Q9UKT9 509 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 ANAPC1Q9H1A4 1944 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 TBKBP1A7MCY6 615 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 CASQ2O14958 399 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 KLKB1P03952 638 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 MTHFD2P13995 350 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 ATP5C1P36542 298 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 FOXA1P55317 472 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 GSTA3Q16772 222 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 AGKQ53H12 422 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 FOXB2Q5VYV0 432 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 RAET1EQ8TD07 263 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 WBP2Q969T9 261 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 L3HYPDHQ96EM0 354 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 KLHL32Q96NJ5 620 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 TTPALQ9BTX7 342 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 VCXQ9H320 206 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 ZDHHC7Q9NXF8 308 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 GIMAP2Q9UG22 337 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 LRFN2Q9ULH4 789 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 PCDHGA7Q9Y5G6 932 aa18.69■□□□□ 0.58
TSPAN4-210ENST00000464987 UBA6A0AVT1 1052 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 ME2P23368 584 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 STC1P52823 247 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 INHBCP55103 352 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 FASTKQ14296 549 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 GRAMD1BQ3KR37 738 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 C5orf22Q49AR2 442 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 SETMARQ53H47 684 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 ALG1LQ6GMV1 187 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 MRNIPQ6NTE8 343 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 PQLC1Q8N2U9 271 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 PTGR2Q8N8N7 351 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 GPR150Q8NGU9 434 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 NR1H4Q96RI1 486 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 NACA2Q9H009 215 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 DNMT3LQ9UJW3 386 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 FAM50BQ9Y247 325 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 MED16Q9Y2X0 877 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 A0A1B0GTL3 188 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 CAPN8A6NHC0 703 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 SNUPNO95149 360 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 NDST3O95803 873 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 EPOP01588 193 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 INHAP05111 366 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 COL6A1P12109 1028 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 HERVK_113P63132 956 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 GALNT1Q10472 559 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 UGT3A2Q3SY77 523 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 PAOXQ6QHF9 649 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms