RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 HSFX1Q9UBD0 423 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 SEPT3Q9UH03 358 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 SFMBT1Q9UHJ3 866 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 MTF2Q9Y483 593 aaPredicted RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 COPG1Q9Y678 874 aaKnown RBP8.53□□□□□ -1.04
ACTB-208ENST00000464611 CENPFP49454 3210 aa8.53□□□□□ -1.04
ACTB-208ENST00000464611 SHROOM3Q8TF72 1996 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PLXNA3P51805 1871 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 NLRC5Q86WI3 1866 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TCAF2A6NFQ2 919 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 C2orf81A6NN90 581 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 A8MT66 165 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 MEI4A8MW99 385 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 H3BNX3 289 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 IFRD1O00458 451 aaPredicted RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 CD3EAPO15446 510 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 NRP2O60462 931 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 MGEA5O60502 916 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 SOAT2O75908 522 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TNFAIP8O95379 198 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 MATN4O95460 622 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 NDST3O95803 873 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 CHEK2O96017 543 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TIMP1P01033 207 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 AMHP03971 560 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ALDH2P05091 517 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 C8BP07358 591 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ZDHHC11BP0C7U3 371 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PABPC4LP0CB38 370 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 HOXB6P17509 224 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 FDXRP22570 491 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 CD86P42081 329 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 GLRBP48167 497 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PPP3CCP48454 512 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 SLC11A2P49281 568 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 CDH4P55283 916 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PSME3P61289 254 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 MPP1Q00013 466 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 RHDQ02161 417 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 FOLH1Q04609 750 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 SULT2A1Q06520 285 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 BNIP2Q12982 314 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 FASTKQ14296 549 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 CSHL1Q14406 222 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ZNF235Q14590 738 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PDK3Q15120 406 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 CTXN3Q4LDR2 81 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 LIN52Q52LA3 116 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 AARS2Q5JTZ9 985 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 ZNF678Q5SXM1 525 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ARTNQ5T4W7 220 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 RASIP1Q5U651 963 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PIK3R6Q5UE93 754 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 UGT3A1Q6NUS8 523 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 CNSTQ6PJW8 725 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ATG14Q6ZNE5 492 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ARHGAP36Q6ZRI8 547 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 FKBP9P1Q75LS8 142 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 C14orf80Q86SX3 495 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 CUZD1Q86UP6 607 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 AHI1Q8N157 1196 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PACRGLQ8N7B6 248 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TXNDC5Q8NBS9 432 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 NETO2Q8NC67 525 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 OR4L1Q8NH43 312 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ARRDC2Q8TBH0 407 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TRPC4APQ8TEL6 797 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 FBXO32Q969P5 355 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 HDAC10Q969S8 669 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 RCN3Q96D15 328 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 HMCESQ96FZ2 354 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 SH3GL3Q99963 347 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PAAF1Q9BRP4 392 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TMEM175Q9BSA9 504 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 NUSAP1Q9BXS6 441 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 MRPL9Q9BYD2 267 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 NOL6Q9H6R4 1146 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 SUDS3Q9H7L9 328 aaPredicted RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 NMUR1Q9HB89 426 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 PAPOLBQ9NRJ5 636 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 TAS2R13Q9NYV9 303 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.52□□□□□ -1.05
ACTB-208ENST00000464611 CROTQ9UKG9 612 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ADAMTS6Q9UKP5 1117 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 INPP5FQ9Y2H2 1132 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 TBC1D30Q9Y2I9 924 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 COMMD3-BMI1R4GMX3 469 aa8.52□□□□□ -1.05
ACTB-208ENST00000464611 ZNF638Q14966 1978 aaKnown RBP8.52□□□□□ -1.05
ACTB-208ENST00000464611 PRSS51A0A1B0GVH4 220 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 ARHGAP10A1A4S6 786 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 LCHNA4D1U4 455 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 AQP12BA6NM10 295 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 F5H5T6 163 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 GOLGA8TH3BQL2 631 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 STX16-NPEPL1H3BU86 382 aa8.51□□□□□ -1.05
ACTB-208ENST00000464611 NEMP1O14524 444 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms