RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 RDH14Q9HBH5 336 aa22.65■■□□□ 1.22
USP4-208ENST00000464168 LMBRD1Q9NUN5 540 aa22.65■■□□□ 1.22
USP4-208ENST00000464168 A0A1W2PQC6 194 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 TMEM191CA6NGB0 347 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 TMCO5BA8MYB1 307 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 ATMINO43313 823 aaPredicted RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 FGF1P05230 155 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 CEACAM5P06731 702 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 CCDC172P0C7W6 258 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 MYCLP1P12525 358 aaPredicted RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 CCNB1P14635 433 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 WT1P19544 449 aaPredicted RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 TNFAIP3P21580 790 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 MAZP56270 477 aaKnown RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 OR1D5P58170 312 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 SLC10A7Q0GE19 358 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 TSR1Q2NL82 804 aaKnown RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 PPP6R3Q5H9R7 873 aaPredicted RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 ZNF438Q7Z4V0 828 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 PIM3Q86V86 326 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 TRIM7Q9C029 511 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 CARS2Q9HA77 564 aaKnown RBP22.64■■□□□ 1.21
USP4-208ENST00000464168 STARD5Q9NSY2 213 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 SEPT3Q9UH03 358 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 PCDHGA4Q9Y5G9 962 aa22.64■■□□□ 1.21
USP4-208ENST00000464168 HTRA2O43464 458 aaPredicted RBP22.63■■□□□ 1.21
USP4-208ENST00000464168 CPNE6O95741 557 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 ITGB6P18564 788 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 MIPP30301 263 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 HCAR3P49019 387 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 RENBPP51606 427 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 MYL5Q02045 173 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 DPYSQ14117 519 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 LBRQ14739 615 aaKnown RBP22.63■■□□□ 1.21
USP4-208ENST00000464168 CNGA3Q16281 694 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 AMZ1Q400G9 498 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 MAP9Q49MG5 647 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 ZNF574Q6ZN55 896 aaPredicted RBP22.63■■□□□ 1.21
USP4-208ENST00000464168 CBARPQ8N350 705 aaPredicted RBP22.63■■□□□ 1.21
USP4-208ENST00000464168 ZDHHC1Q8WTX9 485 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 NUS1Q96E22 293 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 ARHGAP9Q9BRR9 750 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 TEX101Q9BY14 249 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 FAM117AQ9C073 453 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 B3GNT4Q9C0J1 378 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 HSD3B7Q9H2F3 369 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 SUDS3Q9H7L9 328 aaPredicted RBP22.63■■□□□ 1.21
USP4-208ENST00000464168 CWC15Q9P013 229 aaKnown RBP22.63■■□□□ 1.21
USP4-208ENST00000464168 PCDHGC4Q9Y5F7 938 aa22.63■■□□□ 1.21
USP4-208ENST00000464168 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 CYSRT1A8MQ03 144 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 PRPSAP2O60256 369 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 RNF8O76064 485 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 FAM87AP0C7U9 286 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 CCL4P13236 92 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 CDK11BP21127 795 aaKnown RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 TMCO4Q5TGY1 634 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 PPP1R2P3Q6NXS1 205 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 HEATR4Q86WZ0 1026 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 PSTKQ8IV42 348 aaKnown RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 PTCD2Q8WV60 388 aaKnown RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 ZNF599Q96NL3 588 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 FRMD8Q9BZ67 464 aaPredicted RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 PHPT1Q9NRX4 125 aaPredicted RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 TAAR2Q9P1P5 351 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 PCDHB11Q9Y5F2 797 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 HEMK1Q9Y5R4 338 aaPredicted RBP22.62■■□□□ 1.21
USP4-208ENST00000464168 ST14Q9Y5Y6 855 aa22.62■■□□□ 1.21
USP4-208ENST00000464168 BSNQ9UPA5 3926 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 RHPN2P1A8MT19 583 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.61■■□□□ 1.21
USP4-208ENST00000464168 HEXIM1O94992 359 aaKnown RBP22.61■■□□□ 1.21
USP4-208ENST00000464168 PEX11BO96011 259 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 CR2P20023 1033 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 CD82P27701 267 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 CD1CP29017 333 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 ALDH4A1P30038 563 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 VIPR1P32241 457 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 ILF3Q12906 894 aaKnown RBP eCLIP22.61■■□□□ 1.21
USP4-208ENST00000464168 PTPN13Q12923 2485 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 NR1D2Q14995 579 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 TBR1Q16650 682 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 CLEC17AQ6ZS10 378 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 HSD11B1LQ7Z5J1 315 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 PGBD5Q8N414 524 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 LZTR1Q8N653 840 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 FNIP1Q8TF40 1166 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 NUDT22Q9BRQ3 303 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 GSDMCQ9BYG8 508 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 TRNAU1APQ9NX07 287 aaKnown RBP22.61■■□□□ 1.21
USP4-208ENST00000464168 FLNCQ14315 2725 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 COL12A1Q99715 3063 aa22.61■■□□□ 1.21
USP4-208ENST00000464168 SOCS5O75159 536 aa22.6■■□□□ 1.21
USP4-208ENST00000464168 ECEL1O95672 775 aa22.6■■□□□ 1.21
USP4-208ENST00000464168 AK4P27144 223 aaPredicted RBP22.6■■□□□ 1.21
USP4-208ENST00000464168 ETV3P41162 512 aa22.6■■□□□ 1.21
USP4-208ENST00000464168 CSRP3P50461 194 aa22.6■■□□□ 1.21
USP4-208ENST00000464168 ZNF135P52742 658 aaPredicted RBP22.6■■□□□ 1.21
USP4-208ENST00000464168 CYP4F2P78329 520 aa22.6■■□□□ 1.21
USP4-208ENST00000464168 NCAPHQ15003 741 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms