RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MRPL40Q9NQ50 206 aaKnown RBP16.96■□□□□ 0.3
ACTB-207ENST00000462494 TBC1D30Q9Y2I9 924 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 AP4S1Q9Y587 144 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 IGLV3-10A0A075B6K4 115 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 LRRC14BA6NHZ5 514 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 PPP6CO00743 305 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 MUSKO15146 869 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 CSPG5O95196 566 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 CD1DP15813 335 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 STX1BP61266 288 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 HERVK_113P63132 956 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 SERINC3Q13530 473 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 SEMA3AQ14563 771 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 TRIP4Q15650 581 aaPredicted RBP16.95■□□□□ 0.3
ACTB-207ENST00000462494 PFKFB4Q16877 469 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 LARP4Q71RC2 724 aaKnown RBP eCLIP16.95■□□□□ 0.31e-78■□□□□ 8.8
ACTB-207ENST00000462494 PTGR2Q8N8N7 351 aaPredicted RBP16.95■□□□□ 0.3
ACTB-207ENST00000462494 TMEM102Q8N9M5 508 aaPredicted RBP16.95■□□□□ 0.3
ACTB-207ENST00000462494 EME1Q96AY2 570 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 L3HYPDHQ96EM0 354 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 FAM193BQ96PV7 902 aaPredicted RBP16.95■□□□□ 0.3
ACTB-207ENST00000462494 SLC25A23Q9BV35 468 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 ERVK-6Q9BXR3 956 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 PTGDR2Q9Y5Y4 395 aa16.95■□□□□ 0.3
ACTB-207ENST00000462494 CCDC162PA2VCL2 907 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 UBXN8O00124 270 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 NRP2O60462 931 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 SRP72O76094 671 aaKnown RBP16.94■□□□□ 0.3
ACTB-207ENST00000462494 WISP3O95389 354 aaPredicted RBP16.94■□□□□ 0.3
ACTB-207ENST00000462494 PABPC4LP0CB38 370 aaKnown RBP16.94■□□□□ 0.3
ACTB-207ENST00000462494 CCND3P30281 292 aaPredicted RBP16.94■□□□□ 0.3
ACTB-207ENST00000462494 FLT3LGP49771 235 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 SH3BP2P78314 561 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 CDKL1Q00532 357 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 TAF10Q12962 218 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 NRF1Q16656 503 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 ARMC3Q5W041 872 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 MRNIPQ6NTE8 343 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 IYDQ6PHW0 289 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 CYHR1Q6ZMK1 362 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 COLGALT2Q8IYK4 626 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 CFAP52Q8N1V2 620 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 ZFAND2BQ8WV99 257 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 MID1IP1Q9NPA3 183 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.94■□□□□ 0.34e-25■□□□□ 10.3
ACTB-207ENST00000462494 GIMAP2Q9UG22 337 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 CROTQ9UKG9 612 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 TRIM24O15164 1050 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 AP1G1O43747 822 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 OR6B1O95007 311 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 PRSS56P0CW18 603 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 SMIM18P0DKX4 95 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 FDXRP22570 491 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 FGFR3P22607 806 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 PBX3P40426 434 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 SLC26A3P40879 764 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 DSC1Q08554 894 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 PARP15Q460N3 678 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 PITRM1Q5JRX3 1037 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 LRTOMTQ8WZ04 291 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 TADA1Q96BN2 335 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 SEPT5Q99719 369 aaPredicted RBP16.94■□□□□ 0.3
ACTB-207ENST00000462494 AKTIPQ9H8T0 292 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 IL1RL2Q9HB29 575 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 LZTS1Q9Y250 596 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 ACTL7AQ9Y615 435 aa16.94■□□□□ 0.3
ACTB-207ENST00000462494 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 ALDOCP09972 364 aaKnown RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 OR4D1Q15615 310 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 MGAT5BQ3V5L5 792 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 RAB44Q7Z6P3 723 aaPredicted RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 DDIASQ8IXT1 998 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 CLYBLQ8N0X4 340 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 TLR8Q9NR97 1041 aaKnown RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 CATSPERZQ9NTU4 200 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 POLR3BQ9NW08 1133 aaPredicted RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 DNAJC15Q9Y5T4 150 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 MYOCOSA0A1B0GUC4 107 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 DRGXA6NNA5 263 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 RPP40O75818 363 aaKnown RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 CLPTM1O96005 669 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 GFAPP14136 432 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 ATP6V1B1P15313 513 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 PSMD8P48556 350 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 SLC7A2P52569 658 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 TIAL1Q01085 375 aaKnown RBP eCLIP16.93■□□□□ 0.32e-13■■□□□ 13
ACTB-207ENST00000462494 MAP7D1Q3KQU3 841 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 FAM171A1Q5VUB5 890 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 SLC24A5Q71RS6 500 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 OR4L1Q8NH43 312 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 NAT14Q8WUY8 206 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
ACTB-207ENST00000462494 SARDHQ9UL12 918 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 SNX13Q9Y5W8 968 aa16.93■□□□□ 0.3
ACTB-207ENST00000462494 A0A0D9SEW6 157 aa16.92■□□□□ 0.3
ACTB-207ENST00000462494 H3BMM5 538 aa16.92■□□□□ 0.3
ACTB-207ENST00000462494 NR5A2O00482 541 aa16.92■□□□□ 0.3
ACTB-207ENST00000462494 CDK14O94921 469 aa16.92■□□□□ 0.3
ACTB-207ENST00000462494 FGF1P05230 155 aa16.92■□□□□ 0.3
ACTB-207ENST00000462494 C8BP07358 591 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms