RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 GOLGA6AQ9NYA3 693 aa15.41■□□□□ 0.06
SKA3-204ENST00000462482 CWC15Q9P013 229 aaKnown RBP15.41■□□□□ 0.06
SKA3-204ENST00000462482 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
SKA3-204ENST00000462482 PHTF1Q9UMS5 762 aa15.41■□□□□ 0.06
SKA3-204ENST00000462482 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 CPNE6O95741 557 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 MBD3O95983 291 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 CCNB1P14635 433 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 SERPINB6P35237 376 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 PCK1P35558 622 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 ZFP36L1Q07352 338 aaKnown RBP15.4■□□□□ 0.06
SKA3-204ENST00000462482 KLHL30Q0D2K2 578 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 SLC10A7Q0GE19 358 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 CLPPQ16740 277 aaPredicted RBP15.4■□□□□ 0.06
SKA3-204ENST00000462482 AMZ1Q400G9 498 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 RALGPS1Q5JS13 557 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 CCDC183Q5T5S1 534 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 NYAP1Q6ZVC0 841 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 USP45Q70EL2 814 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 APTXQ7Z2E3 356 aaKnown RBP15.4■□□□□ 0.06
SKA3-204ENST00000462482 HEATR4Q86WZ0 1026 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 ATPAF2Q8N5M1 289 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 ARFGAP1Q8N6T3 406 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 ZDHHC1Q8WTX9 485 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 COQ10AQ96MF6 247 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 NUDCD1Q96RS6 583 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 LGR4Q9BXB1 951 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 FAM117AQ9C073 453 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 SEMA4CQ9C0C4 833 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 TRNAU1APQ9NX07 287 aaKnown RBP15.4■□□□□ 0.06
SKA3-204ENST00000462482 PCDHGC4Q9Y5F7 938 aa15.4■□□□□ 0.06
SKA3-204ENST00000462482 AGRPO00253 132 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 SLC28A2O43868 658 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 LRCH4O75427 683 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 HEXIM1O94992 359 aaKnown RBP15.39■□□□□ 0.05
SKA3-204ENST00000462482 ITIH1P19827 911 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 CD82P27701 267 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 ALDH4A1P30038 563 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 GNPDA1P46926 289 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 PPM1FP49593 454 aaPredicted RBP15.39■□□□□ 0.05
SKA3-204ENST00000462482 DPYSQ14117 519 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 NCAPHQ15003 741 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 CNGA3Q16281 694 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 ARMC12Q5T9G4 340 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 MARC1Q5VT66 337 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 KCTD16Q68DU8 428 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 RAET1GQ6H3X3 334 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 CCDC112Q8NEF3 446 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 CCL4L1Q8NHW4 92 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 GPBAR1Q8TDU6 330 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 SPOCK2Q92563 424 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 HSPH1Q92598 858 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 USP7Q93009 1102 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 SYT11Q9BT88 431 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 ZMYND15Q9H091 742 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
SKA3-204ENST00000462482 HAUS2Q9NVX0 235 aa15.39■□□□□ 0.05
SKA3-204ENST00000462482 TDRD6O60522 2096 aaKnown RBP15.39■□□□□ 0.05
SKA3-204ENST00000462482 PRAMEF33A0A0G2JMD5 474 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 A0A1W2PQC6 194 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 PSMD11O00231 422 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 EFSO43281 561 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 HTRA2O43464 458 aaPredicted RBP15.38■□□□□ 0.05
SKA3-204ENST00000462482 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 ITGB2P05107 769 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 SFTPCP11686 197 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 MMP13P45452 471 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 CDH6P55285 790 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 TYRO3Q06418 890 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 TGIF1Q15583 401 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 DPYSL2Q16555 572 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 ZNF571Q7Z3V5 609 aaPredicted RBP15.38■□□□□ 0.05
SKA3-204ENST00000462482 DTD2Q96FN9 168 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 TEX101Q9BY14 249 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 TRIM7Q9C029 511 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 B3GNT4Q9C0J1 378 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 CDH19Q9H159 772 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 NOD2Q9HC29 1040 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.38■□□□□ 0.05
SKA3-204ENST00000462482 SPATS2LQ9NUQ6 558 aaKnown RBP15.38■□□□□ 0.05
SKA3-204ENST00000462482 AIPL1Q9NZN9 384 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 TAAR2Q9P1P5 351 aa15.38■□□□□ 0.05
SKA3-204ENST00000462482 HELZ2Q9BYK8 2649 aaKnown RBP15.37■□□□□ 0.05
SKA3-204ENST00000462482 ZNF462Q96JM2 2506 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 TTC24A2A3L6 582 aaPredicted RBP15.37■□□□□ 0.05
SKA3-204ENST00000462482 HGSO14964 777 aaPredicted RBP15.37■□□□□ 0.05
SKA3-204ENST00000462482 GM2AP17900 193 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 AMPD1P23109 780 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 ETV3P41162 512 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 PRKCIP41743 596 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 GPR3P46089 330 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 GPR1P46091 355 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 ATP1A2P50993 1020 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 MAZP56270 477 aaKnown RBP15.37■□□□□ 0.05
SKA3-204ENST00000462482 OR1D5P58170 312 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 CDK3Q00526 305 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 B4GALNT1Q00973 533 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 ITKQ08881 620 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 PIGHQ14442 188 aaPredicted RBP15.37■□□□□ 0.05
SKA3-204ENST00000462482 KRT81Q14533 505 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms