RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 Q8N9G6 341 aaPredicted RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 WDR36Q8NI36 951 aaKnown RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 KCNE4Q8WWG9 221 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 AP2M1Q96CW1 435 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 ECHDC3Q96DC8 303 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 SCRN2Q96FV2 425 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 MGME1Q9BQP7 344 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 ADGRE3Q9BY15 652 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 TCEAL2Q9H3H9 227 aaPredicted RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 STN1Q9H668 368 aaKnown RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 EPB41L5Q9HCM4 733 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 AMACRQ9UHK6 382 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 SATB2Q9UPW6 733 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 PCDHB1Q9Y5F3 818 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 DGKBQ9Y6T7 804 aa8.88□□□□□ -0.99
LDB1-203ENST00000461873 KMT2BQ9UMN6 2715 aaPredicted RBP8.88□□□□□ -0.99
LDB1-203ENST00000461873 CFAP47Q6ZTR5 3102 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 LRRK1Q38SD2 2015 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CCDC187A0A096LP49 1063 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 SSU72P8A0A1W2PR75 194 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 PRSS38A1L453 326 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 TRAFD1O14545 582 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 PPP1R12AO14974 1030 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 MATN3O15232 486 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 KLK10O43240 276 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 HTRA2O43464 458 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 SPOPO43791 374 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 HEXIM1O94992 359 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 PGLSO95336 258 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CAPNS1P04632 268 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 RPLP0P05388 317 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 HOXC4P09017 264 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 GIMD1P0DJR0 217 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CCNB1P14635 433 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 GLB1P16278 677 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 ZNF30P17039 623 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CTPS1P17812 591 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 PBX1P40424 430 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 NOP2P46087 812 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 GNPDA1P46926 289 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 TMPRSS3P57727 454 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CXADRP78310 365 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 SLC25A11Q02978 314 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 DPYSL3Q14195 570 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 MAP9Q49MG5 647 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 TPRG1LQ5T0D9 272 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CDCP2Q5VXM1 449 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 DOK6Q6PKX4 331 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 GPR155Q7Z3F1 870 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 HEATR4Q86WZ0 1026 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 ZSWIM9Q86XI8 627 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 JAMLQ86YT9 394 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 RFX6Q8HWS3 928 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CCDC13Q8IYE1 715 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 FBXO39Q8N4B4 442 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 PLA2G15Q8NCC3 412 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 FUBP1Q96AE4 644 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 CCDC74AQ96AQ1 378 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 PDXPQ96GD0 296 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 ATXN7L3BQ96GX2 97 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 AHCYL2Q96HN2 611 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 FCRL3Q96P31 734 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 UBL7Q96S82 380 aaPredicted RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 RBM15Q96T37 977 aaKnown RBP eCLIP8.87□□□□□ -0.99
LDB1-203ENST00000461873 FERMT1Q9BQL6 677 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 DPH1Q9BZG8 443 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 CDH19Q9H159 772 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 MRPL40Q9NQ50 206 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 ETNK2Q9NVF9 386 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 DDX56Q9NY93 547 aaKnown RBP8.87□□□□□ -0.99
LDB1-203ENST00000461873 PKD2L2Q9NZM6 624 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 SEPT10Q9P0V9 454 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 LRIT1Q9P2V4 623 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.87□□□□□ -0.99
LDB1-203ENST00000461873 HEY1Q9Y5J3 304 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 USP24Q9UPU5 2620 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 IGF2RP11717 2491 aa8.87□□□□□ -0.99
LDB1-203ENST00000461873 AKAP13Q12802 2813 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 TMEM202A6NGA9 273 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 AKR1B15C9JRZ8 316 aaPredicted RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 APOL1O14791 398 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 MFSD11O43934 449 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 TNFSF15O95150 251 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 PTMAP06454 111 aaKnown RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 TCF4P15884 667 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 MAN1A1P33908 653 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 ETV3P41162 512 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 MLLT3P42568 568 aaPredicted RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 SLC1A1P43005 524 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 INHBCP55103 352 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 NAP1L1P55209 391 aaKnown RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 GALNT2Q10471 571 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 RALGDSQ12967 914 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 PAFAH1B3Q15102 231 aaKnown RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 PDK1Q15118 436 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms