RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ACSL1P33121 698 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 SHMT1P34896 483 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 EIF2DP41214 584 aaKnown RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 LMAN1P49257 510 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 MRPL12P52815 198 aaKnown RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 ZP1P60852 638 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 ADORA2A-AS1P86434 159 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 CAPSQ13938 189 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 NAB2Q15742 525 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 C15orf59Q2T9L4 293 aaPredicted RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 ASTE1Q2TB18 679 aaPredicted RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 ZSCAN23Q3MJ62 389 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 PXDC1Q5TGL8 231 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 GPR139Q6DWJ6 353 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 LRRC8EQ6NSJ5 796 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 SLC30A6Q6NXT4 461 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 TMEM71Q6P5X7 295 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 KRBA2Q6ZNG9 492 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 MRPL10Q7Z7H8 261 aaKnown RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 WDR63Q8IWG1 891 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 ZBTB2Q8N680 514 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 TMEM174Q8WUU8 243 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 MSI2Q96DH6 328 aaKnown RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 GFM1Q96RP9 751 aaKnown RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 SLF1Q9BQI6 1058 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 NPFFR1Q9GZQ6 430 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 CATSPERBQ9H7T0 1116 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 RANGRFQ9HD47 186 aaPredicted RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 KRCC1Q9NPI7 259 aaPredicted RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 CYSLTR2Q9NS75 346 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 GIMAP4Q9NUV9 329 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 OGFRQ9NZT2 677 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 UBA2Q9UBT2 640 aaPredicted RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 ZNF112Q9UJU3 913 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 RPS6KA6Q9UK32 745 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 PCDHGB4Q9UN71 923 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 NFE2L3Q9Y4A8 694 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 LSM4Q9Y4Z0 139 aaKnown RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 RAI2Q9Y5P3 530 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 HS3ST3B1Q9Y662 390 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 LOC100509620A0A075B734 347 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 A0A1W2PQ09 198 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 TMEM202A6NGA9 273 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 FAM90A8PA6NJQ4 464 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 MS4A18H0YCH9 400 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 SNAP23O00161 211 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 BEST1O76090 585 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 NKX2-2O95096 273 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 PGM3O95394 542 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 FAM90A13PP0C7W8 464 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 FAM90A24PP0C7X0 464 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 AKR1B1P15121 316 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 GABRB1P18505 474 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 IL11P20809 199 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 HOXD9P28356 352 aaPredicted RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 KRT20P35900 424 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 SLC15A1P46059 708 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 PPP3CCP48454 512 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 CXCR3P49682 368 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 CAMPP49913 170 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 MRPS34P82930 218 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 BECN1Q14457 450 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 NEDD9Q14511 834 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 SOWAHAQ2M3V2 549 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 COL28A1Q2UY09 1125 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 Q4G0T1 1027 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 PPP6R3Q5H9R7 873 aaPredicted RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 KIAA1161Q6NSJ0 714 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 METTL2BQ6P1Q9 378 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 QSOX2Q6ZRP7 698 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 CACNA2D4Q7Z3S7 1137 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 GPSM1Q86YR5 675 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 SLC35F3Q8IY50 421 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 MB21D2Q8IYB1 491 aaPredicted RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 MMP21Q8N119 569 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 AGBL3Q8NEM8 1001 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 SAT2Q96F10 170 aaPredicted RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 RRNAD1Q96FB5 475 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 METTL2AQ96IZ6 378 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 ZNF570Q96NI8 536 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 SH3GL2Q99962 352 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 TMEM79Q9BSE2 394 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 TRNAU1APQ9NX07 287 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 MRPL15Q9P015 296 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 MARCH4Q9P2E8 410 aaPredicted RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 EXO1Q9UQ84 846 aaKnown RBP3.89□□□□□ -1.79
CLK1-206ENST00000461326 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
CLK1-206ENST00000461326 CCDC180Q9P1Z9 1646 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 GLOD5A6NK44 160 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 ADAM10O14672 748 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 JRKO75564 520 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 ARSBP15848 533 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 PON1P27169 355 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 KCNJ4P48050 445 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 ME1P48163 572 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 ENTPD1P49961 510 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 TMPRSS3P57727 454 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 SELENOVP59797 346 aa3.88□□□□□ -1.79
CLK1-206ENST00000461326 IKQ13123 557 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms