RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 HS3ST4Q9Y661 456 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 NUP205Q92621 2012 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 RIF1Q5UIP0 2472 aaKnown RBP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 NRP2O60462 931 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 CNTN5O94779 1100 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 LYNP07948 512 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 DHRS4L1P0CG22 281 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 FASP25445 335 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 CCNFP41002 786 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 MLLT6P55198 1093 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 PITRM1Q5JRX3 1037 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 ANO7Q6IWH7 933 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 IL27RAQ6UWB1 636 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 FIBCD1Q8N539 461 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 SLC2A13Q96QE2 648 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 KCTD14Q9BQ13 255 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 ALBP02768 609 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 CCNG1P51959 295 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 FPGSQ05932 587 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 DPYSQ14117 519 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 PTPRCAPQ14761 206 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 ZBTB6Q15916 424 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 TTLL9Q3SXZ7 439 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 RETSATQ6NUM9 610 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 OR56A4Q8NGH8 313 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 OR13C4Q8NGS5 318 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 RNF145Q96MT1 663 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 GPR22Q99680 433 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 EBF3Q9H4W6 596 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 EURLQ9NYK6 297 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 AGO1Q9UL18 857 aaKnown RBP11.65□□□□□ -0.54
NPHP4-204ENST00000460696 KCTD3Q9Y597 815 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 SNX5Q9Y5X3 404 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
NPHP4-204ENST00000460696 CCDC154A6NI56 674 aa11.65□□□□□ -0.55
NPHP4-204ENST00000460696 URODP06132 367 aa11.65□□□□□ -0.55
NPHP4-204ENST00000460696 VCLP18206 1134 aa11.65□□□□□ -0.55
NPHP4-204ENST00000460696 AOC1P19801 751 aa11.65□□□□□ -0.55
NPHP4-204ENST00000460696 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.55
NPHP4-204ENST00000460696 PKDCCQ504Y2 493 aa11.65□□□□□ -0.55
NPHP4-204ENST00000460696 KIAA0930Q6ICG6 404 aaPredicted RBP11.65□□□□□ -0.55
NPHP4-204ENST00000460696 AP4B1Q9Y6B7 739 aa11.65□□□□□ -0.55
NPHP4-204ENST00000460696 MYO1GB0I1T2 1018 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 UBXN8O00124 270 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 FFAR3O14843 346 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 GPR42O15529 346 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 SIX3O95343 332 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 GOT2P00505 430 aaKnown RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ITGAXP20702 1163 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 TACR2P21452 398 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 MAP4P27816 1152 aaKnown RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 CHN2P52757 468 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 AQP4P55087 323 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 FBXL22Q6P050 247 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 KIAA0408Q6ZU52 694 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 SZRD1Q7Z422 152 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 OR10T2Q8NGX3 314 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 SPPL2BQ8TCT7 592 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 DLG3Q92796 817 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 EIF3LQ9Y262 564 aaKnown RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ARL5AQ9Y689 179 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ZBTB14O43829 449 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 FKBP9O95302 570 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 LRG1P02750 347 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ZNF865P0CJ78 1059 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 UQCRBP14927 111 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ZNF7P17097 686 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 LPOP22079 712 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 THOP1P52888 689 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 RPS24P62847 133 aaKnown RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 CHRNB3Q05901 458 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 GTF2H3Q13889 308 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 GSTA3Q16772 222 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ARMC12Q5T9G4 340 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 PLPP4Q5VZY2 271 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 PPP2R2DQ66LE6 453 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 FKBP9P1Q75LS8 142 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 TMEM135Q86UB9 458 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 APLFQ8IW19 511 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 PTCD2Q8WV60 388 aaKnown RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ASB8Q9H765 288 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 KCNK13Q9HB14 408 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 POLR2AP24928 1970 aaKnown RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 XRCC1P18887 633 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-204ENST00000460696 MC4RP32245 332 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ACVRL1P37023 503 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 EPHB3P54753 998 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 MILR1Q7Z6M3 343 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 PIM3Q86V86 326 aa11.64□□□□□ -0.55
NPHP4-204ENST00000460696 ZNF280BQ86YH2 543 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms