RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 TBC1D3GQ6DHY5 549 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 TBC1D3CQ6IPX1 549 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 KIAA1161Q6NSJ0 714 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 LIPIQ6XZB0 460 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 LYSMD3Q7Z3D4 306 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 ANKMY2Q8IV38 441 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 GSPT2Q8IYD1 628 aaKnown RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 TBC1D3Q8IZP1 549 aaPredicted RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 CBARPQ8N350 705 aaPredicted RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 TTC30BQ8N4P2 665 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 AENQ8WTP8 325 aaKnown RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 CAVIN3Q969G5 261 aa12.48□□□□□ -0.41
ZNF3-211ENST00000460331 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 USP36Q9P275 1121 aaKnown RBP12.48□□□□□ -0.41
ZNF3-211ENST00000460331 MROH6A6NGR9 719 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 AXIN1O15169 862 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-211ENST00000460331 BANF1O75531 89 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 TM7SF2O76062 418 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 SLC4A1P02730 911 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 LIG3P49916 1009 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 STC1P52823 247 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 RPS21P63220 83 aaKnown RBP12.47□□□□□ -0.41
ZNF3-211ENST00000460331 PRAMEP78395 509 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 PTSQ03393 145 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 RALGDSQ12967 914 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 ACOX1Q15067 660 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 CNGA3Q16281 694 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 USP39Q53GS9 565 aaKnown RBP12.47□□□□□ -0.41
ZNF3-211ENST00000460331 SPDYCQ5MJ68 293 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 TSPAN33Q86UF1 283 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF3-211ENST00000460331 OR4K2Q8NGD2 314 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 OR2T34Q8NGX1 318 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 ZNF669Q96BR6 464 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-211ENST00000460331 CFAP36Q96G28 342 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 SPACA7Q96KW9 195 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 C9orf72Q96LT7 481 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 C1QTNF7Q9BXJ2 289 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 CDC42EP4Q9H3Q1 356 aaKnown RBP12.47□□□□□ -0.41
ZNF3-211ENST00000460331 VPS37BQ9H9H4 285 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 C2orf42Q9NWW7 574 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 IL17CQ9P0M4 197 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 SERGEFQ9UGK8 458 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 APPL1Q9UKG1 709 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 CYP8B1Q9UNU6 501 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 ARL5AQ9Y689 179 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
ZNF3-211ENST00000460331 K7ESF4 209 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 WNT9AO14904 365 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 AURKAO14965 403 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 MMP20O60882 483 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 RPP40O75818 363 aaKnown RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 LHCGRP22888 699 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 PSMA3P25788 255 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 NMBRP28336 390 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 CD6P30203 668 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 SPAM1P38567 509 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 ZNF140P52738 457 aaPredicted RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 ADPRHP54922 357 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 TAS2R38P59533 333 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 SEMG2Q02383 582 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 ACVR1Q04771 509 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 SGCGQ13326 291 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 FRG1Q14331 258 aaKnown RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 FASTKD3Q14CZ7 662 aaKnown RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 PTPRRQ15256 657 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 KYNUQ16719 465 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 MAP7D1Q3KQU3 841 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 UNC5AQ6ZN44 842 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 CYS1Q717R9 158 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 FAM124AQ86V42 546 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 IGDCC3Q8IVU1 814 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 NRSN1Q8IZ57 195 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 OR13C4Q8NGS5 318 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 CALML6Q8TD86 181 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 UBLCP1Q8WVY7 318 aaPredicted RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 CDKL2Q92772 493 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 MFSD3Q96ES6 412 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 CDKN2AIPNLQ96HQ2 116 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 PLEKHG4BQ96PX9 1271 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 WRAP53Q9BUR4 548 aaKnown RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 ARFGAP3Q9NP61 516 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 TREX1Q9NSU2 369 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 WSB2Q9NYS7 404 aaPredicted RBP12.46□□□□□ -0.41
ZNF3-211ENST00000460331 NINJ2Q9NZG7 142 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 ITM2BQ9Y287 266 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 SLC30A1Q9Y6M5 507 aa12.46□□□□□ -0.41
ZNF3-211ENST00000460331 FAM47DPA6NHR8 397 aa12.45□□□□□ -0.42
ZNF3-211ENST00000460331 H7C0S8 307 aa12.45□□□□□ -0.42
ZNF3-211ENST00000460331 BUD23O43709 281 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms