RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 KDELR1P24390 212 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 SSR1P43307 286 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 HADHBP55084 474 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 TRAF2Q12933 501 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 ARHGEF7Q14155 803 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 ACOX1Q15067 660 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 CNGA3Q16281 694 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 DEFB133Q30KQ1 61 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 SARM1Q6SZW1 724 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 BZW1Q7L1Q6 419 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 TP53INP2Q8IXH6 220 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 NRSN1Q8IZ57 195 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 LSM14AQ8ND56 463 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 PIH1D2Q8WWB5 315 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 FUBP1Q96AE4 644 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 NUS1Q96E22 293 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 BTBD6Q96KE9 485 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 LYSMD1Q96S90 227 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 TRNAU1APQ9NX07 287 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 APPL1Q9UKG1 709 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 PCDHGC4Q9Y5F7 938 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 PCDHGA8Q9Y5G5 932 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 FASNP49327 2511 aaKnown RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 A0A0J9YYE9 177 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 CPED1A4D0V7 1026 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 MFSD11O43934 449 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 BRINP1O60477 761 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 CSO75390 466 aaKnown RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 TRBC1P01850 177 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 PCCBP05166 539 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 CCNB1P14635 433 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 GLB1P16278 677 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 ABCG1P45844 678 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 UCNP55089 124 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 PCBP4P57723 403 aaKnown RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 IFI35P80217 286 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 PPIDQ08752 370 aaKnown RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 CDKN3Q16667 212 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 GUSBP11Q6P575 273 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 KDM7AQ6ZMT4 941 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 TECPR1Q7Z6L1 1165 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 ZNF248Q8NDW4 579 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 GPR156Q8NFN8 814 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 SLC35G2Q8TBE7 412 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 KIAA1524Q8TCG1 905 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 TSACCQ96A04 125 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 TMEM159Q96B96 161 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 SCARF2Q96GP6 870 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 LIN37Q96GY3 246 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 NSMCE3Q96MG7 304 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 RNF157Q96PX1 679 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 SRPK1Q96SB4 655 aaKnown RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 SEMA3CQ99985 751 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 CDH19Q9H159 772 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 TCEAL2Q9H3H9 227 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 NT5MQ9NPB1 228 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 DDX56Q9NY93 547 aaKnown RBP10.01□□□□□ -0.81
HDLBP-228ENST00000459788 GPR34Q9UPC5 381 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 OR1A2Q9Y585 309 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 RAI2Q9Y5P3 530 aa10.01□□□□□ -0.81
HDLBP-228ENST00000459788 PRSS38A1L453 326 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 TMEM202A6NGA9 273 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 CAPN8A6NHC0 703 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 NUDT21O43809 227 aaKnown RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 USP12O75317 370 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 IVLP07476 585 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 CD48P09326 243 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 TGM2P21980 687 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 NR2C2P49116 596 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 TAS2R40P59535 323 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 SEMG2Q02383 582 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 MMRN1Q13201 1228 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 TBX2Q13207 712 aaPredicted RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 C1orf61Q13536 156 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 SPIDRQ14159 915 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 PDK1Q15118 436 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 SLC9A4Q6AI14 798 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 ADAMTSL4Q6UY14 1074 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 PDZD3Q86UT5 571 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 C17orf82Q86X59 251 aaPredicted RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 MARCH9Q86YJ5 346 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 CCDC13Q8IYE1 715 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 PQLC3Q8N755 202 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 PLA2G15Q8NCC3 412 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 WDR36Q8NI36 951 aaKnown RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 PDCD6IPQ8WUM4 868 aaKnown RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 OR1E3Q8WZA6 343 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 PDXPQ96GD0 296 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 HIC2Q96JB3 615 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 TMEM74Q96NL1 305 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 CCDC3Q9BQI4 270 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 TDRD1Q9BXT4 1180 aaKnown RBP10□□□□□ -0.81
HDLBP-228ENST00000459788 GSDMCQ9BYG8 508 aa10□□□□□ -0.81
HDLBP-228ENST00000459788 FRMD8Q9BZ67 464 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms