RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 GOLGA8HP0CJ92 632 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 OPN1MW2P0DN77 364 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 OPN1MW3P0DN78 364 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF35P13682 527 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TRIM27P14373 513 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 BRAFP15056 766 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF44P15621 663 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZFXP17010 805 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 BPIP17213 487 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF10P21506 573 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 XPAP23025 273 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 GLRA1P23415 457 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ACRV1P26436 265 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 GCH1P30793 250 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 FMO4P31512 558 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 HIBADHP31937 336 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CCKARP32238 428 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 RDXP35241 583 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 RPL4P36578 427 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TXLNAP40222 546 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 EIF2S3P41091 472 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 MATR3P43243 847 aaKnown RBP eCLIP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 RAD52P43351 418 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 GZMKP49863 264 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF80P51504 273 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PRKAA2P54646 552 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 AQP5P55064 265 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 UBASH3AP57075 661 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 VSX2P58304 361 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF121P58317 390 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 RTP1P59025 263 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 IL1RL1Q01638 556 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF154Q13106 437 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 HTR4Q13639 388 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PDE6HQ13956 83 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PDE1CQ14123 709 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 VGLL4Q14135 290 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TTLL4Q14679 1199 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PTGR1Q14914 329 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNHIT3Q15649 155 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF174Q15697 407 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PCK2Q16822 640 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PFKFB3Q16875 520 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CEACAM21Q3KPI0 293 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 KIAA1644Q3SXP7 199 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 C14orf28Q4W4Y0 310 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ESCO1Q5FWF5 840 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 FAM201AQ5SY85 155 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 MRPL2Q5T653 305 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 GARNL3Q5VVW2 1013 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SHEQ5VZ18 495 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF57Q68EA5 555 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CWF19L1Q69YN2 538 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 NAPEPLDQ6IQ20 393 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SWSAP1Q6NVH7 229 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 DUS1LQ6P1R4 473 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PGBD2Q6P3X8 592 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CCDC174Q6PII3 467 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 GLIPR1L1Q6UWM5 242 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CHST15Q7LFX5 561 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 DEFB132Q7Z7B7 95 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TTC7BQ86TV6 843 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNF761Q86XN6 746 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TMEM25Q86YD3 366 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 WDR63Q8IWG1 891 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 DCP1BQ8IZD4 617 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CFAP52Q8N1V2 620 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 NXPE1Q8N323 547 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 ZNRF1Q8ND25 227 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 OR5L2Q8NGL0 311 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 UBA3Q8TBC4 463 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 RNASE8Q8TDE3 154 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 NETO1Q8TDF5 533 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SH3RF2Q8TEC5 729 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 FAM168AQ92567 244 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 RND1Q92730 232 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TRIM52Q96A61 297 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 FAR2Q96K12 515 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CNOT6LQ96LI5 555 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CCDC140Q96MF4 163 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 LRFN5Q96NI6 719 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TMEM74Q96NL1 305 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SIGLEC12Q96PQ1 595 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PAFAH2Q99487 392 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 NRTNQ99748 197 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SYT15Q9BQS2 421 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 WDR83Q9BRX9 315 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 HIRIP3Q9BW71 556 aaPredicted RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SLC26A6Q9BXS9 759 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 DEFB126Q9BYW3 111 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 OSBPL6Q9BZF3 934 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 PABPC3Q9H361 631 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 BICC1Q9H694 974 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 TDRD3Q9H7E2 651 aaKnown RBP-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 SLC38A10Q9HBR0 1119 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 CHST12Q9NRB3 414 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 YAE1D1Q9NRH1 226 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 INTS13Q9NVM9 706 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 DCAF16Q9NXF7 216 aa-1.98□□□□□ -2.73
SNORD54-201ENST00000459159 P4HTMQ9NXG6 502 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms