RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NDUFAF2Q8N183 169 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 PAF1Q8N7H5 531 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 MFSD2AQ8NA29 543 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 GLIS1Q8NBF1 620 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 LPCAT1Q8NF37 534 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CXorf40AQ8TE69 158 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 TCEAL3Q969E4 200 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 BMFQ96LC9 184 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 SLC6A18Q96N87 628 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 RTKNQ9BST9 563 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 MLPHQ9BV36 600 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 ADGRE3Q9BY15 652 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CNTNAP3Q9BZ76 1288 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 RXFP3Q9NSD7 469 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CA5BQ9Y2D0 317 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 COQ6Q9Y2Z9 468 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 SAR1BQ9Y6B6 198 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 KNTC1P50748 2209 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 POM121BA6NF01 834 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 PGRMC1O00264 195 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 VILLO15195 856 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 ANXA9O76027 345 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 NDST3O95803 873 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 AGTP01019 485 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 CFIP05156 583 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 ATXN1LP0C7T5 689 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 ETS1P14921 441 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 HNRNPA2B1P22626 353 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 NFKBIAP25963 317 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 CD38P28907 300 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 ADRA1AP35348 466 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 GRIA4P48058 902 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 AFF3P51826 1226 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 EPHB1P54762 984 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 GEMP55040 296 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 GALNT3Q14435 633 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 STAT4Q14765 748 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 CNGA3Q16281 694 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 PCSK7Q16549 785 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 WSCD2Q2TBF2 565 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 KCTD11Q693B1 232 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 RANBP10Q6VN20 620 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 PRR23CQ6ZRP0 262 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 USP45Q70EL2 814 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 TECPR1Q7Z6L1 1165 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 PRUNE1Q86TP1 453 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 TSPAN33Q86UF1 283 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 IQCHQ86VS3 1027 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 C12orf50Q8NA57 414 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 TP53I13Q8NBR0 393 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 ATL2Q8NHH9 583 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 EID2BQ96D98 161 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 COQ10AQ96MF6 247 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 NAP1L3Q99457 506 aaPredicted RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 MAGEE1Q9HCI5 957 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 FZD3Q9NPG1 666 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 FSCN3Q9NQT6 498 aa10.07□□□□□ -0.8
ATG4A-206ENST00000457035 MBNL1Q9NR56 388 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 AAR2Q9Y312 384 aaKnown RBP10.07□□□□□ -0.8
ATG4A-206ENST00000457035 SCN8AQ9UQD0 1980 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 SPTBN2O15020 2390 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 A0A1B0GVT2 93 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 LNP1A1A4G5 178 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 CAPN8A6NHC0 703 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 H0Y8X5 98 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 TLR4O00206 839 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 PSMD11O00231 422 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 CDX4O14627 284 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 LZTS3O60299 673 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 GDF9O60383 454 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 RECQL5O94762 991 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 CLDN7O95471 211 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 IFNB1P01574 187 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ELFN1P0C7U0 828 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ZSCAN5DPP0CG00 497 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ZNF30P17039 623 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 AKT2P31751 481 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 RPL22P35268 128 aaKnown RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 COILP38432 576 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 CHRNA4P43681 627 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 CLDN2P57739 230 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 OVGP1Q12889 678 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 MSLNQ13421 630 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-206ENST00000457035 OLIG2Q13516 323 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 ARHGEF7Q14155 803 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 PRPSAP1Q14558 356 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 SLC1A5Q15758 541 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 KIF19Q2TAC6 998 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 LRRC66Q68CR7 880 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 DENND5AQ6IQ26 1287 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 LAYNQ6UX15 382 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 SYT10Q6XYQ8 523 aa10.06□□□□□ -0.8
ATG4A-206ENST00000457035 GCNT7Q6ZNI0 430 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms