RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CLCQ05315 142 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 POLD3Q15054 466 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-208ENST00000456385 PSMD5Q16401 504 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 IMPG1Q17R60 797 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 SLC25A52Q3SY17 297 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 FUT11Q495W5 492 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 ZNF789Q5FWF6 425 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 SYPL2Q5VXT5 272 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 FAM160B1Q5W0V3 765 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 BTBD8Q5XKL5 378 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 IQSEC1Q6DN90 963 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 SPATA22Q8NHS9 363 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 GABPB2Q8TAK5 448 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-208ENST00000456385 PNPT1Q8TCS8 783 aaKnown RBP10.33□□□□□ -0.76
CLIP4-208ENST00000456385 C19orf60Q96EN9 201 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 FAR2Q96K12 515 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 IL12RB2Q99665 862 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 HOPXQ9BPY8 73 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-208ENST00000456385 HGH1Q9BTY7 390 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 KIFC1Q9BW19 673 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 ATP13A3Q9H7F0 1226 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 EML4Q9HC35 981 aaKnown RBP10.33□□□□□ -0.76
CLIP4-208ENST00000456385 AKIP1Q9NQ31 210 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 RCOR3Q9P2K3 495 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-208ENST00000456385 DSEQ9UL01 958 aa10.33□□□□□ -0.76
CLIP4-208ENST00000456385 IGKV6-21A0A0C4DH24 114 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TCRBV5S2A0A599 114 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 I6L893 689 aaPredicted RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 M0QYT0 321 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 WNT10BO00744 389 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ANGPT2O15123 496 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TPD52L2O43399 206 aaKnown RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 HUS1O60921 280 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ABCB7O75027 752 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 JCHAINP01591 159 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 HTR1AP08908 422 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 CRHBPP24387 322 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 LEPRP48357 1165 aaKnown RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 NKX2-5P52952 324 aaPredicted RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 HMGCS2P54868 508 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 OCA2Q04671 838 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 CDH17Q12864 832 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 GRB7Q14451 532 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ACAP2Q15057 778 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 MAPK11Q15759 364 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 DPY19L1Q2PZI1 675 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TECRLQ5HYJ1 363 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 AGAP7PQ5VUJ5 663 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 EFCAB12Q6NXP0 572 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 KDELC2Q7Z4H8 507 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 MINDY1Q8N5J2 469 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SLC22A17Q8WUG5 538 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 AFG1LQ8WV93 481 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 LRRC58Q96CX6 371 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 NRBF2Q96F24 287 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 KIF12Q96FN5 646 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 YTHDF1Q9BYJ9 559 aaKnown RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 GSTO2Q9H4Y5 243 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ASB7Q9H672 318 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 HMG20AQ9NP66 347 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SCUBE2Q9NQ36 999 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 PIGVQ9NUD9 493 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 INTS10Q9NVR2 710 aaKnown RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 MTRRQ9UBK8 725 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ZFC3H1O60293 1989 aaKnown RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 CCDC162PA2VCL2 907 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 A6NL46 340 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 H3BMM5 538 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SUPT7LO94864 414 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 INMTO95050 263 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 MT-CYBP00156 380 aaPredicted RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 LDLRP01130 860 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 GPIP06744 558 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 S100A1P23297 94 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 LMO2P25791 158 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 KCNC1P48547 511 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 GSK3BP49841 420 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 BNIP2Q12982 314 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TRIM32Q13049 653 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TUBA3CQ13748 450 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TIGD2Q4W5G0 525 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 FKBP1CQ5VVH2 108 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ZNF470Q6ECI4 717 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SLCO6A1Q86UG4 719 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ANKRD13BQ86YJ7 626 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 PARP8Q8N3A8 854 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 AFAP1L2Q8N4X5 818 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 PTCD2Q8WV60 388 aaKnown RBP10.32□□□□□ -0.76
CLIP4-208ENST00000456385 VPS33AQ96AX1 596 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 RNF145Q96MT1 663 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TMEM74Q96NL1 305 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 TEX13BQ9BXU2 312 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 ALG2Q9H553 416 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 NSMCE4AQ9NXX6 385 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 SLAMF8Q9P0V8 285 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 NDUFAF1Q9Y375 327 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 PCDHGA11Q9Y5H2 935 aa10.32□□□□□ -0.76
CLIP4-208ENST00000456385 DNAJC15Q9Y5T4 150 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms