RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 KCTD3Q9Y597 815 aa20.11■□□□□ 0.81
CSPG5-203ENST00000456150 PCDHGA7Q9Y5G6 932 aa20.11■□□□□ 0.81
CSPG5-203ENST00000456150 GREB1Q4ZG55 1949 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 CAPN8A6NHC0 703 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 GOT2P00505 430 aaKnown RBP20.1■□□□□ 0.81
CSPG5-203ENST00000456150 HERVK_113P63132 956 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 MRPL58Q14197 206 aaKnown RBP20.1■□□□□ 0.81
CSPG5-203ENST00000456150 AGKQ53H12 422 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 REP15Q6BDI9 236 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 RPS27LQ71UM5 84 aaKnown RBP20.1■□□□□ 0.81
CSPG5-203ENST00000456150 BLOC1S5Q8TDH9 187 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 TSEN34Q9BSV6 310 aaKnown RBP20.1■□□□□ 0.81
CSPG5-203ENST00000456150 SLC25A23Q9BV35 468 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 ERVK-6Q9BXR3 956 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 CACNA2D2Q9NY47 1150 aa20.1■□□□□ 0.81
CSPG5-203ENST00000456150 PRSS51A0A1B0GVH4 220 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 ENO4A6NNW6 628 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 DENRO43583 198 aaKnown RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 SLC4A1P02730 911 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 SNRPB2P08579 225 aaKnown RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 CD1DP15813 335 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 OGNP20774 298 aaKnown RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 MSX2P35548 267 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 ACVRL1P37023 503 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 CHN2P52757 468 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 FAM171A1Q5VUB5 890 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 RAB44Q7Z6P3 723 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 PIM3Q86V86 326 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 SPATA24Q86W54 205 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 BBS5Q8N3I7 341 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 HMGCLL1Q8TB92 370 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 BRSK1Q8TDC3 778 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 DNAJC1Q96KC8 554 aaKnown RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 SPATA17Q96L03 361 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 GCNAQ96QF7 691 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 STARD7Q9NQZ5 370 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 RAB26Q9ULW5 256 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 BPTFQ12830 3046 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 SERPINF2P08697 491 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 TACR2P21452 398 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 SUOXP51687 545 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 LRP8Q14114 963 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 RASIP1Q5U651 963 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 PNPLA1Q8N8W4 532 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 COPS7BQ9H9Q2 264 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-203ENST00000456150 CATSPERZQ9NTU4 200 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 ARL5AQ9Y689 179 aa20.09■□□□□ 0.81
CSPG5-203ENST00000456150 ANKRD36A6QL64 1941 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 UBFD1O14562 309 aaKnown RBP20.08■□□□□ 0.81
CSPG5-203ENST00000456150 AP1G1O43747 822 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 ARPP19P56211 112 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 STX1BP61266 288 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 TRIM25Q14258 630 aaKnown RBP20.08■□□□□ 0.81
CSPG5-203ENST00000456150 PPP1R3AQ16821 1122 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 MGAT5BQ3V5L5 792 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 UNC50Q53HI1 259 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 TRAF7Q6Q0C0 670 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 CLYBLQ8N0X4 340 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 MARVELD2Q8N4S9 558 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 PTERQ96BW5 349 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 DEFB118Q96PH6 123 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 CCDC167Q9P0B6 97 aa20.08■□□□□ 0.81
CSPG5-203ENST00000456150 CCDC162PA2VCL2 907 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 F5H5T6 163 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 SOAT2O75908 522 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 COL6A1P12109 1028 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 KCNC1P48547 511 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 HSPA13P48723 471 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 MBTPS1Q14703 1052 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 ALG1LQ6GMV1 187 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 ZNF549Q6P9A3 640 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 SLC30A9Q6PML9 568 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 HACD2Q6Y1H2 254 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 LARP4Q71RC2 724 aaKnown RBP eCLIP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 PCDH20Q8N6Y1 951 aaKnown RBP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 OR52K2Q8NGK3 314 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 OR4L1Q8NH43 312 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 RHEBL1Q8TAI7 183 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 RIN3Q8TB24 985 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 C19orf60Q96EN9 201 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 SEPT5Q99719 369 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 PDFQ9HBH1 243 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 SPAG4Q9NPE6 437 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 PAPOLBQ9NRJ5 636 aaKnown RBP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 TMEM161AQ9NX61 479 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 CHD5Q8TDI0 1954 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 MTMR11A4FU01 709 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 ZNF37AP17032 561 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 TCN1P20061 433 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 ACADVLP49748 655 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 SMARCB1Q12824 385 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 TRAP1Q12931 704 aaKnown RBP20.07■□□□□ 0.8
CSPG5-203ENST00000456150 GALNT3Q14435 633 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 LIN52Q52LA3 116 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 CLEC6AQ6EIG7 209 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 NADSYN1Q6IA69 706 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 FBXL19Q6PCT2 694 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 UGT2A3Q6UWM9 527 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 TICAM1Q8IUC6 712 aa20.07■□□□□ 0.8
CSPG5-203ENST00000456150 SPNS2Q8IVW8 549 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms