RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 IMP4Q96G21 291 aaKnown RBP17.37■□□□□ 0.37
USP39-208ENST00000455732 TEKT5Q96M29 485 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 LYSMD1Q96S90 227 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 HERPUD2Q9BSE4 406 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 HEMGNQ9BXL5 484 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 SLC25A51Q9H1U9 297 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 PCDH9Q9HC56 1237 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 SEPT10Q9P0V9 454 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 ZMIZ1Q9ULJ6 1067 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 PCDHGA1Q9Y5H4 931 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 CAPN6Q9Y6Q1 641 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 ASXL3Q9C0F0 2248 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 CAPN8A6NHC0 703 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 TRIM38O00635 465 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 KRT86O43790 486 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 ZNF30P17039 623 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 ACADVLP49748 655 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 THOP1P52888 689 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 WASHC5Q12768 1159 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 EIF2B5Q13144 721 aaKnown RBP17.36■□□□□ 0.37
USP39-208ENST00000455732 PROX2Q3B8N5 592 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 ZNF542PQ5EBM4 170 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 ESRP1Q6NXG1 681 aaKnown RBP17.36■□□□□ 0.37
USP39-208ENST00000455732 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP39-208ENST00000455732 DTD2Q96FN9 168 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 HES6Q96HZ4 224 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 TBATAQ96M53 351 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 AGAP3Q96P47 875 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 VAT1Q99536 393 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 CEP41Q9BYV8 373 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 GLOD4Q9HC38 313 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 DNAJC28Q9NX36 388 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 KLF15Q9UIH9 416 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 CHKBQ9Y259 395 aa17.36■□□□□ 0.37
USP39-208ENST00000455732 ANKRD11Q6UB99 2663 aaPredicted RBP17.36■□□□□ 0.37
USP39-208ENST00000455732 ACACAQ13085 2346 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 A8MX80 341 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 H3BM21 787 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 DDX3YO15523 660 aaKnown RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 SIGLEC6O43699 453 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 TJP3O95049 919 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 FTCDO95954 541 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 CAPNS1P04632 268 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 PCCBP05166 539 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 HOXC4P09017 264 aaPredicted RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 C1SP09871 688 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 ALPIP09923 528 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 PYGMP11217 842 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 CTPS1P17812 591 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 HNF1BP35680 557 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 EPHB1P54762 984 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 CCZ1BP86790 482 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 CCZ1P86791 482 aaPredicted RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 ZNF211Q13398 564 aaPredicted RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 ARHGEF7Q14155 803 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 INPP5AQ14642 412 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 NFATC4Q14934 902 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 ACOX1Q15067 660 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 SMAD1Q15797 465 aaKnown RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 B4GALNT4Q76KP1 1039 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 TSPAN33Q86UF1 283 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 ZC3H18Q86VM9 953 aaKnown RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 RAVER1Q8IY67 606 aaKnown RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 OR4C6Q8NH72 309 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 HTR3CQ8WXA8 447 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 ZCCHC14Q8WYQ9 949 aaKnown RBP17.35■□□□□ 0.37
USP39-208ENST00000455732 HAUS1Q96CS2 278 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 NUS1Q96E22 293 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 TRIB3Q96RU7 358 aa17.35■□□□□ 0.37
USP39-208ENST00000455732 GOLGA6L3A6NEY3 463 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 NRDCO43847 1150 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 CCDC175P0C221 793 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 TRIM23P36406 574 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 RP1P56715 2156 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 KIAA1024LP59773 190 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 CCDC157Q569K6 752 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 CCDC181Q5TID7 509 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 LRRC66Q68CR7 880 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 CRTC1Q6UUV9 634 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 DHRS13Q6UX07 377 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 HSD11B1LQ7Z5J1 315 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 GALNT15Q8N3T1 639 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 PLA2G15Q8NCC3 412 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 ZNF548Q8NEK5 533 aaPredicted RBP17.34■□□□□ 0.37
USP39-208ENST00000455732 LPCAT1Q8NF37 534 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 ATL2Q8NHH9 583 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 ACTL9Q8TC94 416 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 BTN2A2Q8WVV5 523 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 RBM15Q96T37 977 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP39-208ENST00000455732 APOOQ9BUR5 198 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 ADGRE3Q9BY15 652 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 PNMA8BQ9ULN7 279 aaPredicted RBP17.34■□□□□ 0.37
USP39-208ENST00000455732 PACSIN2Q9UNF0 486 aaPredicted RBP17.34■□□□□ 0.37
USP39-208ENST00000455732 CSNK1G3Q9Y6M4 447 aa17.34■□□□□ 0.37
USP39-208ENST00000455732 APC2O95996 2303 aa17.33■□□□□ 0.37
USP39-208ENST00000455732 ANKRD66B4E2M5 251 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 SCAMP1O15126 338 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 RFPL3O75679 317 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 ZNF189O75820 626 aaPredicted RBP17.33■□□□□ 0.36
USP39-208ENST00000455732 CDK4P11802 303 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms