RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ACOX1Q15067 660 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 DEFB109BQ30KR1 87 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 UNC5BQ8IZJ1 945 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 NTAN1Q96AB6 310 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 ATP13A3Q9H7F0 1226 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 IGHV1OR21-1A0A087WYE8 117 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 A8MX80 341 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 CREB3O43889 395 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 GM2AP17900 193 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 KLRB1Q12918 225 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 SLFN11Q7Z7L1 901 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 EFHD1Q9BUP0 239 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 PDFQ9HBH1 243 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 PHPT1Q9NRX4 125 aaPredicted RBP23.24■■□□□ 1.31
PTPRA-208ENST00000455631 KCNK4Q9NYG8 393 aa23.24■■□□□ 1.31
PTPRA-208ENST00000455631 LOC101059948A0A1B0GTJ6 334 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 PPM1DO15297 605 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 RGRP47804 291 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 DPPA4Q7L190 304 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 HEATR4Q86WZ0 1026 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 NAGSQ8N159 534 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 EPS8L1Q8TE68 723 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 STARD8Q92502 1023 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 CENPIQ92674 756 aaPredicted RBP23.23■■□□□ 1.31
PTPRA-208ENST00000455631 NUS1Q96E22 293 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 TEFMQ96QE5 360 aaKnown RBP23.23■■□□□ 1.31
PTPRA-208ENST00000455631 CTRCQ99895 268 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 DPYSL5Q9BPU6 564 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 C11orf70Q9BRQ4 267 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 CATSPERBQ9H7T0 1116 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 TRNAU1APQ9NX07 287 aaKnown RBP23.23■■□□□ 1.31
PTPRA-208ENST00000455631 SUFUQ9UMX1 484 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 TP53TG5Q9Y2B4 290 aa23.23■■□□□ 1.31
PTPRA-208ENST00000455631 ICE1Q9Y2F5 2266 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 J3KR12 359 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 MAP4P27816 1152 aaKnown RBP23.22■■□□□ 1.31
PTPRA-208ENST00000455631 CD97P48960 835 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 MAN2A1Q16706 1144 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 AFMIDQ63HM1 303 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 DPY19L2P1Q6NXN4 242 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 C16orf46Q6P387 395 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 KDELC2Q7Z4H8 507 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 SRLQ86TD4 932 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 UMODL1-AS1Q8N2C9 162 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 BMPERQ8N8U9 685 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 RTP4Q96DX8 246 aa23.22■■□□□ 1.31
PTPRA-208ENST00000455631 SPTBN1Q01082 2364 aaKnown RBP23.21■■□□□ 1.31
PTPRA-208ENST00000455631 MYO9AB2RTY4 2548 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 USP9XQ93008 2570 aaPredicted RBP23.21■■□□□ 1.31
PTPRA-208ENST00000455631 FUCA1P04066 466 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 CEACAM5P06731 702 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 NR1D1P20393 614 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 MMP8P22894 467 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 MLLT10P55197 1068 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 MC1RQ01726 317 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 BCL2L1Q07817 233 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 SNAP47Q5SQN1 464 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 ATP1A1-AS1Q5TC04 95 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 TMEM71Q6P5X7 295 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 TSEN2Q8NCE0 465 aaKnown RBP23.21■■□□□ 1.31
PTPRA-208ENST00000455631 SLC20A1Q8WUM9 679 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 PTCD2Q8WV60 388 aaKnown RBP23.21■■□□□ 1.31
PTPRA-208ENST00000455631 ECHDC3Q96DC8 303 aa23.21■■□□□ 1.31
PTPRA-208ENST00000455631 AHCYL2Q96HN2 611 aaKnown RBP23.21■■□□□ 1.31
PTPRA-208ENST00000455631 PLEKHB1Q9UF11 243 aaPredicted RBP23.21■■□□□ 1.31
PTPRA-208ENST00000455631 NOTCH2Q04721 2471 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 WASH4PA8MWX3 477 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 PRAMEF11O60813 436 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 KRT7P08729 469 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 TCN2P20062 427 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 MAN1A1P33908 653 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 POLR2LP62875 67 aaKnown RBP23.2■■□□□ 1.3
PTPRA-208ENST00000455631 GPLD1P80108 840 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 CTBSQ01459 385 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 SQSTM1Q13501 440 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 PEX6Q13608 980 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 KLHDC7AQ5VTJ3 777 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 SCYL2Q6P3W7 929 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 ZNF761Q86XN6 746 aaPredicted RBP23.2■■□□□ 1.3
PTPRA-208ENST00000455631 SLC30A5Q8TAD4 765 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 CELF6Q96J87 481 aaKnown RBP23.2■■□□□ 1.3
PTPRA-208ENST00000455631 FRMD8Q9BZ67 464 aaPredicted RBP23.2■■□□□ 1.3
PTPRA-208ENST00000455631 NDST4Q9H3R1 872 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 ST14Q9Y5Y6 855 aa23.2■■□□□ 1.3
PTPRA-208ENST00000455631 UTP20O75691 2785 aaKnown RBP23.19■■□□□ 1.3
PTPRA-208ENST00000455631 GOLGA6CA6NDK9 693 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 GOLGA6BA6NDN3 693 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 A8MU76 341 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 F8VZ95 297 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 PALMO75781 387 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 GOLGA6DP0CG33 693 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 KRT3P12035 628 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 PRKCSHP14314 528 aaPredicted RBP23.19■■□□□ 1.3
PTPRA-208ENST00000455631 GPD1P21695 349 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 ERCC5P28715 1186 aaPredicted RBP23.19■■□□□ 1.3
PTPRA-208ENST00000455631 ACTR1BP42025 376 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 CSNK1DP48730 415 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 ACTR1AP61163 376 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 CDK3Q00526 305 aa23.19■■□□□ 1.3
PTPRA-208ENST00000455631 ABHD18Q0P651 414 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms