RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MAPK10P53779 464 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 PTP4A2Q12974 167 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 NR1D2Q14995 579 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ACOX1Q15067 660 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TCEA2Q15560 299 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TGIF1Q15583 401 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 RAB6CQ53S08 254 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 PNCKQ6P2M8 343 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 LIPIQ6XZB0 460 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ZNF574Q6ZN55 896 aaPredicted RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 MON1BQ7L1V2 547 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ZNF438Q7Z4V0 828 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 CAMK1DQ8IU85 385 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 PSTKQ8IV42 348 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 PYROXD2Q8N2H3 581 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 BBS5Q8N3I7 341 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ANKK1Q8NFD2 765 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 NEK11Q8NG66 645 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ENOX1Q8TC92 643 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ECHDC3Q96DC8 303 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 CATSPER2Q96P56 530 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 MCEEQ96PE7 176 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TAAR9Q96RI9 348 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 ASPSCR1Q9BZE9 553 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 KLC2Q9H0B6 622 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 RAB6CQ9H0N0 254 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TMEM168Q9H0V1 697 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 NUP62CLQ9H1M0 184 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 CYP4F12Q9HCS2 524 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 FGF22Q9HCT0 170 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 NLRC4Q9NPP4 1024 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 SAMSN1Q9NSI8 373 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 GEMIN8Q9NWZ8 242 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TRNAU1APQ9NX07 287 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TAB2Q9NYJ8 693 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 MOSPD1Q9UJG1 213 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 PCDHGA3Q9Y5H0 932 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 SDK2Q58EX2 2172 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 ZFC3H1O60293 1989 aaKnown RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 TMEM202A6NGA9 273 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 C9orf172C9J069 976 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 J3KR12 359 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PSMD11O00231 422 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 SUV39H1O43463 412 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 BUB1BO60566 1050 aaPredicted RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 SOCS5O75159 536 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 RNF8O76064 485 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PYGLP06737 847 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM87AP0C7U9 286 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 CYP2A6P11509 494 aaPredicted RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 CCNB1P14635 433 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 ITIH1P19827 911 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PAPOLAP51003 745 aaKnown RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 RAB15P59190 212 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 B4GALNT1Q00973 533 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 IL10RBQ08334 325 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 RALGDSQ12967 914 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 SQSTM1Q13501 440 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 KRT31Q15323 416 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 TBR1Q16650 682 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 RALGPS1Q5JS13 557 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 BORAQ6PGQ7 559 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 C17orf82Q86X59 251 aaPredicted RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 ZFAND4Q86XD8 727 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 NDUFAF2Q8N183 169 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 LZTR1Q8N653 840 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 TSEN2Q8NCE0 465 aaKnown RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 OR4D9Q8NGE8 314 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 ZDHHC1Q8WTX9 485 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 NUS1Q96E22 293 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 ZNF599Q96NL3 588 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PSKH2Q96QS6 385 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PCDHB18PQ96TA0 734 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 AGPAT1Q99943 283 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 EFHD1Q9BUP0 239 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 DDA1Q9BW61 102 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 TEX101Q9BY14 249 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 MAGEB5Q9BZ81 275 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 CDH19Q9H159 772 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 SLC25A18Q9H1K4 315 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 VPS16Q9H269 839 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 CARS2Q9HA77 564 aaKnown RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 MRPL40Q9NQ50 206 aaKnown RBP8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PARVAQ9NVD7 372 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 FOXJ2Q9P0K8 574 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 TUBD1Q9UJT1 453 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 AP4E1Q9UPM8 1137 aa8.03□□□□□ -1.12
NIF3L1-209ENST00000454952 PTPN13Q12923 2485 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 TCRBV5S1A1TA0A578 114 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 DFFAO00273 331 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 CASC3O15234 703 aaKnown RBP8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 TEX33O43247 280 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 PRPSAP2O60256 369 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 NTRK1P04629 796 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 IVLP07476 585 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 ATP1A3P13637 1013 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 FERP16591 822 aa8.02□□□□□ -1.13
NIF3L1-209ENST00000454952 ITGB6P18564 788 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms