RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SLC13A5Q86YT5 568 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 NDUFAF2Q8N183 169 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 PELI3Q8N2H9 469 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 PLA2G15Q8NCC3 412 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 NUS1Q96E22 293 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 TBATAQ96M53 351 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 SPATA13Q96N96 652 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 FAM118BQ9BPY3 351 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 C10orf88Q9H8K7 445 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 NFKBIL1Q9UBC1 381 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 FAM153AQ9UHL3 310 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 PNMA8BQ9ULN7 279 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 BTBD3Q9Y2F9 522 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 CNOT1A5YKK6 2376 aaKnown RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 ZNF106Q9H2Y7 1883 aaKnown RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 LOC285095A0A1B0GVY8 99 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 GIPC1O14908 333 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 PIAS2O75928 621 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 NDST3O95803 873 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 SOD1P00441 154 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 PCCBP05166 539 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 TRIM23P36406 574 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 ETV3P41162 512 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 EPHB1P54762 984 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 PTSQ03393 145 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 DPTQ07507 201 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 MPP3Q13368 585 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 ARHGEF7Q14155 803 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 GALNT3Q14435 633 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 NFATC4Q14934 902 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 SUZ12Q15022 739 aaKnown RBP14.17□□□□□ -0.14
HDAC4-205ENST00000454542 ACOX1Q15067 660 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 OASLQ15646 514 aaKnown RBP14.17□□□□□ -0.14
HDAC4-205ENST00000454542 INAVAQ3KP66 663 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 PRAMEF14Q5SWL7 426 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 ANP32BQ92688 251 aaKnown RBP14.17□□□□□ -0.14
HDAC4-205ENST00000454542 RTP4Q96DX8 246 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 MRGPRX2Q96LB1 330 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 CAMK1GQ96NX5 476 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 ADGRE3Q9BY15 652 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 FRMD8P1Q9BZ68 369 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-205ENST00000454542 SLC32A1Q9H598 525 aa14.17□□□□□ -0.14
HDAC4-205ENST00000454542 C5orf60A6NFR6 353 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 PCNX2A6NKB5 2137 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 A8MX80 341 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 K7ESM1 405 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 KCNN4O15554 427 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 DKK1O94907 266 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 EPOP01588 193 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 GIMD1P0DJR0 217 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 TSHRP16473 764 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 WNT3AP56704 352 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 BNIP3Q12983 259 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 PTK2BQ14289 1009 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 INPP5AQ14642 412 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 GSE1Q14687 1217 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 ANKRD20A2Q5SQ80 823 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 ANKRD20A1Q5TYW2 823 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 ANKRD20A3Q5VUR7 823 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 PID1Q7Z2X4 250 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 NLRP8Q86W28 1048 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 GATAD2AQ86YP4 633 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 FUBP1Q96AE4 644 aaKnown RBP14.16□□□□□ -0.14
HDAC4-205ENST00000454542 EID2BQ96D98 161 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 FERMT1Q9BQL6 677 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 APOOQ9BUR5 198 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 MLPHQ9BV36 600 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-205ENST00000454542 CAAP1Q9H8G2 361 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 MAGEE1Q9HCI5 957 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 RSPH14Q9UHP6 348 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 KLF15Q9UIH9 416 aa14.16□□□□□ -0.14
HDAC4-205ENST00000454542 ARID1BQ8NFD5 2236 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-205ENST00000454542 A0A0U1RQS6 177 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ZSCAN12O43309 604 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 LIASO43766 372 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 PMPCBO75439 489 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ITGAVP06756 1048 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ADRB1P08588 477 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 HLA-DPA1P20036 260 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 DGKAP23743 735 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 PSMB4P28070 264 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ADRA1AP35348 466 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 THOP1P52888 689 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 GDF10P55107 478 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 DCDC1P59894 354 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 HNRNPKP61978 463 aaKnown RBP eCLIP14.15□□□□□ -0.14
HDAC4-205ENST00000454542 PCSK7Q16549 785 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 HENMT1Q5T8I9 393 aaKnown RBP14.15□□□□□ -0.14
HDAC4-205ENST00000454542 PNCKQ6P2M8 343 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 DARS2Q6PI48 645 aaKnown RBP14.15□□□□□ -0.14
HDAC4-205ENST00000454542 RFLNAQ6ZTI6 216 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 Q6ZVL8 140 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 NRSN1Q8IZ57 195 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 SLC25A45Q8N413 288 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ZNF548Q8NEK5 533 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-205ENST00000454542 CCDC110Q8TBZ0 833 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ATG4AQ8WYN0 398 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 WDR24Q96S15 920 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 TEX101Q9BY14 249 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms