RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LAMP3Q9UQV4 416 aa4.27□□□□□ -1.73
HMGN3P1-201ENST00000453847 NFE2L3Q9Y4A8 694 aa4.27□□□□□ -1.73
HMGN3P1-201ENST00000453847 WNT6Q9Y6F9 365 aa4.27□□□□□ -1.73
HMGN3P1-201ENST00000453847 MAU2Q9Y6X3 613 aa4.27□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF644Q9H582 1327 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TYW5A2RUC4 315 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CGB1A6NKQ9 187 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 H3BQ06 376 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 K7ESM1 405 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 DNM1LO00429 736 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 FOXD2O60548 495 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ATP2C2O75185 946 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLU7O95391 586 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 LCKP06239 509 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 MMP2P08253 660 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CHRM5P08912 532 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 PCNAP12004 261 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 PRLRP16471 622 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TFEBP19484 476 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 WT1P19544 449 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 DCTDP32321 178 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLC16A2P36021 539 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TCF7P36402 384 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CSE1LP55060 971 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TMF1P82094 1093 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 PLP2Q04941 152 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZNF273Q14593 569 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 LPIN1Q14693 890 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLMAPQ14BN4 828 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ATP13A5Q4VNC0 1218 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CST9LP1Q5W188 147 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TMEM71Q6P5X7 295 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CYB5R4Q7L1T6 521 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TMC8Q8IU68 726 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 EPHX4Q8IUS5 362 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 MCEMP1Q8IX19 187 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZDHHC23Q8IYP9 409 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CCDC170Q8IYT3 715 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 PARP16Q8N5Y8 322 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ARL10Q8N8L6 244 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 KDM1BQ8NB78 822 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 RBM15BQ8NDT2 890 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CFAP61Q8NHU2 1237 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 TEKT4Q8WW24 435 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CAVIN3Q969G5 261 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 RNF183Q96D59 192 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 RRNAD1Q96FB5 475 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ZC3HAV1LQ96H79 300 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 RAB3IPQ96QF0 476 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CRAMP1Q96RY5 1269 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ACOX2Q99424 681 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CITED2Q99967 270 aaPredicted RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 MSTO1Q9BUK6 570 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 EFHD1Q9BUP0 239 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 CDT1Q9H211 546 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ESRP2Q9H6T0 727 aaKnown RBP4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 MMRN2Q9H8L6 949 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 SLC28A3Q9HAS3 691 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 MTRRQ9UBK8 725 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 DNAJB4Q9UDY4 337 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 ACAD8Q9UKU7 415 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 LIPGQ9Y5X9 500 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 KAT6AQ92794 2004 aa4.26□□□□□ -1.73
HMGN3P1-201ENST00000453847 A0A096LPK6 155 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TRAV34A0A0B4J273 112 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 A0A1W2PPM1 405 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 A4D1N5 150 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 H0YAE9 185 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 SMIM22K7EJ46 135 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 RHODO00212 210 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 PSMD14O00487 310 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 UGDHO60701 494 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CREG1O75629 220 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TOMM70O94826 608 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CELF2O95319 508 aaKnown RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CLDN7O95471 211 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 ICAM1P05362 532 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 KRT4P19013 534 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 BMP5P22003 454 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 ATP5F1P24539 256 aaPredicted RBP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TNFRSF8P28908 595 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TNFSF8P32971 234 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 GPR12P47775 334 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 GPR143P51810 404 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 CDH13P55290 713 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TFAP4Q01664 338 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TFF2Q03403 129 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 GRSF1Q12849 480 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 RALGDSQ12967 914 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TUBB2AQ13885 445 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 PROSER3Q2NL68 480 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 LEXMQ3ZCV2 418 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 FAM153CQ494X1 144 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 MIDNQ504T8 468 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 TEX38Q6PEX7 206 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 IYDQ6PHW0 289 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 C11orf88Q6PI97 169 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 PQLC2Q6ZP29 291 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 MTSS1LQ765P7 747 aa4.25□□□□□ -1.73
HMGN3P1-201ENST00000453847 DPPA4Q7L190 304 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms