RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 MMP12P39900 470 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 DHPSP49366 369 aaPredicted RBP8.74□□□□□ -1.01
COL28A1-205ENST00000453441 METAP1P53582 386 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 GDF10P55107 478 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 WNT3AP56704 352 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 OVGP1Q12889 678 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 SGCGQ13326 291 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 SNX1Q13596 522 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 ARHGEF7Q14155 803 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 POM121L1PQ3SYA9 428 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 ARMC3Q5W041 872 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 NAPEPLDQ6IQ20 393 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 CCDC137Q6PK04 289 aaKnown RBP8.74□□□□□ -1.01
COL28A1-205ENST00000453441 KDELC1Q6UW63 502 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 LINC00523Q86TU6 105 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 SYT12Q8IV01 421 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 TMEFF1Q8IYR6 380 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 C17orf53Q8N3J3 647 aaPredicted RBP8.74□□□□□ -1.01
COL28A1-205ENST00000453441 SUMF1Q8NBK3 374 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 KIF18AQ8NI77 898 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 CCDC110Q8TBZ0 833 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 RMDN1Q96DB5 314 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 TRIB3Q96RU7 358 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL28A1-205ENST00000453441 FAM118BQ9BPY3 351 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 C19orf43Q9BQ61 176 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 MLPHQ9BV36 600 aaPredicted RBP8.74□□□□□ -1.01
COL28A1-205ENST00000453441 CDH19Q9H159 772 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 LRRC40Q9H9A6 602 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 PCDH12Q9NPG4 1184 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 EIF2B3Q9NR50 452 aaKnown RBP8.74□□□□□ -1.01
COL28A1-205ENST00000453441 RAD18Q9NS91 495 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 PCYOX1Q9UHG3 505 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 PCDHGA11Q9Y5H2 935 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 CACNA1EQ15878 2313 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 OTOGLQ3ZCN5 2332 aa8.74□□□□□ -1.01
COL28A1-205ENST00000453441 GON4LQ3T8J9 2241 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 A0A1B0GTW7 788 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 A0A1W2PPC4 97 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 A0A1W2PQU0 124 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 FAM47DPA6NHR8 397 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 E7EVH7 732 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PRAMEF26H0Y7S4 382 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF185O15231 689 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PMPCBO75439 489 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 GJB3O75712 270 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 TM7SF2O76062 418 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 FSBPO95073 299 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ECEL1O95672 775 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 AP2A1O95782 977 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 IGHV4-34P06331 123 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PYGLP06737 847 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ELFN1P0C7U0 828 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 HNRNPA2B1P22626 353 aaKnown RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PSMB4P28070 264 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 AKT2P31751 481 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 RACK1P63244 317 aaKnown RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 FAM193AP78312 1265 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 CDK16Q00536 496 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PDE1BQ01064 536 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 NHLH1Q02575 133 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 CREB5Q02930 508 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 SRSF5Q13243 272 aaKnown RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 SEMA5AQ13591 1074 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 LAMB3Q13751 1172 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 DHX34Q14147 1143 aaKnown RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 TEAD4Q15561 434 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 WHAMMP3Q1A5X7 153 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF284Q2VY69 593 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ZDHHC20Q5W0Z9 365 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 TMEM214Q6NUQ4 689 aaKnown RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 B4GALNT4Q76KP1 1039 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF572Q7Z3I7 529 aaPredicted RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 IQCHQ86VS3 1027 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ZSWIM9Q86XI8 627 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 SLC41A1Q8IVJ1 513 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 FRMD1Q8N878 549 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 MNS1Q8NEH6 495 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 LPCAT1Q8NF37 534 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 SPATA22Q8NHS9 363 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 RUBCNQ92622 972 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 GLMNQ92990 594 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 BIRC7Q96CA5 298 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 OXNAD1Q96HP4 312 aaPredicted RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 CAPZA3Q96KX2 299 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 LENG8Q96PV6 779 aaPredicted RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 AP1M1Q9BXS5 423 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 C6orf106Q9H6K1 298 aaPredicted RBP8.73□□□□□ -1.01
COL28A1-205ENST00000453441 C10orf88Q9H8K7 445 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 ARNT2Q9HBZ2 717 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 MAGEE1Q9HCI5 957 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 CD93Q9NPY3 652 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 B4GALT6Q9UBX8 382 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 CDC23Q9UJX2 597 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 PILRBQ9UKJ0 227 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 CHKBQ9Y259 395 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 INVSQ9Y283 1065 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 GPR179Q6PRD1 2367 aa8.73□□□□□ -1.01
COL28A1-205ENST00000453441 SDK1Q7Z5N4 2213 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms