RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PIGFQ07326 219 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 FASTKQ14296 549 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 SMAD1Q15797 465 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 AGKQ53H12 422 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 YIF1BQ5BJH7 314 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 C8orf82Q6P1X6 216 aaPredicted RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 THAP5Q7Z6K1 395 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 KIAA0319LQ8IZA0 1049 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 ADGRG5Q8IZF4 528 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 RGL4Q8IZJ4 473 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CLYBLQ8N0X4 340 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 PELI3Q8N2H9 469 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CELF2-AS1Q8N7Q2 184 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 DTX3Q8N9I9 347 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 TRPV3Q8NET8 790 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 HMGCLL1Q8TB92 370 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 ZNF516Q92618 1163 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 HDAC2Q92769 488 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 SLC39A13Q96H72 371 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 PSKH2Q96QS6 385 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 TTYH2Q9BSA4 534 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 WDR11Q9BZH6 1224 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 SLIRPQ9GZT3 109 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 MIR1-1HGQ9H1L0 117 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 NMRAL1Q9HBL8 299 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 DIABLOQ9NR28 239 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CHRAC1Q9NRG0 131 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 DNMT3LQ9UJW3 386 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 GAKO14976 1311 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 A0A0X1KG70 313 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ZNF99A8MXY4 864 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 CHRNA1P02708 482 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SNRPB2P08579 225 aaKnown RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 CCDC159P0C7I6 412 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 PRKACAP17612 351 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 CD68P34810 354 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 DDOSTP39656 456 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 GP5P40197 560 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 MAGEA12P43365 314 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 POLD2P49005 469 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ACOT2P49753 483 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 OR2B6P58173 313 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 CRADDP78560 199 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 IRF9Q00978 393 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 IKQ13123 557 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 TARDBPQ13148 414 aaKnown RBP eCLIP8.63□□□□□ -1.03
LSM5-208ENST00000450169 TFDP2Q14188 446 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 IMPG1Q17R60 797 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 TYSND1Q2T9J0 566 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ZIK1Q3SY52 487 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 ZBTB41Q5SVQ8 909 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 LIPMQ5VYY2 423 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 GALNT7Q86SF2 657 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 C8orf59Q8N0T1 100 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 FBXL6Q8N531 539 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 DCLK2Q8N568 766 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 CCDC185Q8N715 623 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 PQLC3Q8N755 202 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 FAM83FQ8NEG4 500 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 SLC7A14Q8TBB6 771 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 URGCPQ8TCY9 931 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SLC22A17Q8WUG5 538 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SDCCAG3Q96C92 435 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 DMRTB1Q96MA1 342 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ASB2Q96Q27 587 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SLC25A23Q9BV35 468 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ASPSCR1Q9BZE9 553 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 IL22Q9GZX6 179 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 DHX35Q9H5Z1 703 aaKnown RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 ANKHQ9HCJ1 492 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 TLR9Q9NR96 1032 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SRP68Q9UHB9 627 aaKnown RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 MID2Q9UJV3 735 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 FBXO5Q9UKT4 447 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 TBX20Q9UMR3 447 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 CNTN6Q9UQ52 1028 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 PDE10AQ9Y233 779 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 WBP11Q9Y2W2 641 aaKnown RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 RWDD3Q9Y3V2 267 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 HES2Q9Y543 173 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 CNTNAP4Q9C0A0 1308 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 LOXHD1Q8IVV2 1947 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 A0A096LPK6 155 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 TRPC5OSA6NMA1 111 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 MEN1O00255 615 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SDHDO14521 159 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 NRP2O60462 931 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 CD4P01730 458 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 GPIP06744 558 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 KRT19P08727 400 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 TPSB2P20231 275 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 WEE1P30291 646 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SLC9A3P48764 834 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 NAGLUP54802 743 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SNAP25P60880 206 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 FPGSQ05932 587 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 GALNT3Q14435 633 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SQLEQ14534 574 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms