RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SMIM10L2BP0DMW5 78 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 HARS2P49590 506 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TNK2Q07912 1038 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 VAC14Q08AM6 782 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM32Q13049 653 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC13A2Q13183 592 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 PRPSAP1Q14558 356 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SNAP47Q5SQN1 464 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 STEAP4Q687X5 459 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 HMBOX1Q6NT76 420 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 NPNTQ6UXI9 565 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 OFCC1Q8IZS5 231 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 HPDLQ96IR7 371 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM39Q9HCM9 518 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 ENPP5Q9UJA9 477 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 CDYLQ9Y232 598 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 B8ZZF3 427 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 AVILO75366 819 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 UGT2B4P06133 528 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 DLG2Q15700 870 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 PKDCCQ504Y2 493 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SEL1L3Q68CR1 1132 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 PSTKQ8IV42 348 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 ASB9Q96DX5 294 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 QKIQ96PU8 341 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 ERI2A8K979 691 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM38O00635 465 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TPP1O14773 563 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 TIPRLO75663 272 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 CCNKO75909 580 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 CSH1P0DML2 217 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 CSH2P0DML3 217 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 DNAJB1P25685 340 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SCNN1AP37088 669 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLC6A3Q01959 620 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 ORC1Q13415 861 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 KIZQ2M2Z5 673 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 OTOP3Q7RTS5 596 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 HTR3CQ8WXA8 447 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 PKD2L2Q9NZM6 624 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 CPA4Q9UI42 421 aa13.49□□□□□ -0.25
SYNGAP1-204ENST00000449372 VAPBO95292 243 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 POLR2IP36954 125 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 HSPA14Q0VDF9 509 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 STX5Q13190 355 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 TUBA3CQ13748 450 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 DCAF4L1Q3SXM0 396 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 EPGNQ6UW88 154 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 RASAL3Q86YV0 1011 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CAMK1DQ8IU85 385 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 BEND7Q8N7W2 519 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 PGBD4Q96DM1 585 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 FBXL20Q96IG2 436 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 MARK4Q96L34 752 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 OR52B2Q96RD2 323 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 WARS2Q9UGM6 360 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 SEC14L2O76054 403 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CAPN1P07384 714 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 NCAM1P13591 858 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CTRB1P17538 263 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 POLR2CP19387 275 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 ARRB2P32121 409 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM25Q14258 630 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 XKR4Q5GH76 650 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 PAGE2BQ5JRK9 111 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CTRB2Q6GPI1 263 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 C17orf99Q6UX52 265 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 AGMOQ6ZNB7 445 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CAND1Q86VP6 1230 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 C10orf107Q8IVU9 208 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 PBXIP1Q96AQ6 731 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLCO4A1Q96BD0 722 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 MAP6Q96JE9 813 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CPNE6O95741 557 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 AMHP03971 560 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CASP3P42574 277 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 GALK2Q01415 458 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 CDC20Q12834 499 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 PCBP1Q15365 356 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■□ 22.8
SYNGAP1-204ENST00000449372 TRNP1Q6NT89 227 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 FKBP9P1Q75LS8 142 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 AGR3Q8TD06 166 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 TMEM40Q8WWA1 233 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 PEX13Q92968 403 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 TRIM63Q969Q1 353 aa13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 ZNF717Q9BY31 904 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-204ENST00000449372 MUC3BQ9H195 1237 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms