RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PGM2L1Q6PCE3 622 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 TEX26Q8N6G2 289 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 TM6SF2Q9BZW4 377 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 IL1RL2Q9HB29 575 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 PDFQ9HBH1 243 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 S100A14Q9HCY8 104 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 NSMCE4AQ9NXX6 385 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ARHGAP26Q9UNA1 814 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 BTRCQ9Y297 605 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ZNF840PA6NDX5 716 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 OR6C75A6NL08 312 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 TBC1D4O60343 1298 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ACSL4O60488 711 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 IPO13O94829 963 aaKnown RBP14.82□□□□□ -0.04
SF1-211ENST00000448404 ALDH1A1P00352 501 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 CTPS1P17812 591 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ATP5F1P24539 256 aaPredicted RBP14.82□□□□□ -0.04
SF1-211ENST00000448404 PMLP29590 882 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 C6orf163Q5TEZ5 329 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 TMCO4Q5TGY1 634 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ACAD11Q709F0 780 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ACTRT2Q8TDY3 377 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 ZNF296Q8WUU4 475 aaPredicted RBP14.82□□□□□ -0.04
SF1-211ENST00000448404 NUDT8Q8WV74 236 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 LRCH3Q96II8 777 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 HBEGFQ99075 208 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 CLSTN3Q9BQT9 956 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 PCDHAC1Q9H158 963 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 POLR3BQ9NW08 1133 aaPredicted RBP14.82□□□□□ -0.04
SF1-211ENST00000448404 DLGAP2Q9P1A6 1054 aa14.82□□□□□ -0.04
SF1-211ENST00000448404 H3BNC9 293 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 PRDX3P30048 256 aaKnown RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 CA5AP35218 305 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 NRG1Q02297 640 aaPredicted RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 CYLC2Q14093 348 aaPredicted RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 TSNAXIP1Q2TAA8 658 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 PSAPL1Q6NUJ1 521 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 TMEM154Q6P9G4 183 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 PAQR3Q6TCH7 311 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 NPAS4Q8IUM7 802 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 PTGR2Q8N8N7 351 aaPredicted RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 SLC43A3Q8NBI5 491 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 SPPL2BQ8TCT7 592 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 UBXN10Q96LJ8 280 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 ABCG8Q9H221 673 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 C1orf21Q9H246 121 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 EBF3Q9H4W6 596 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 FCF1Q9Y324 198 aaKnown RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 A0A1B0GVG6 124 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 INSIG1O15503 277 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 MAP3K7O43318 606 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 DNAJA2O60884 412 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 CAPN15O75808 1086 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 STC2O76061 302 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 RTN3O95197 1032 aaPredicted RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 GLP2RO95838 553 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 PRLP01236 227 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 LMNAP02545 664 aaKnown RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 PPARGP37231 505 aaPredicted RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 ALDH7A1P49419 539 aaKnown RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 AGTR2P50052 363 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 CDC16Q13042 620 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 RNF219Q5W0B1 726 aaPredicted RBP14.81□□□□□ -0.04
SF1-211ENST00000448404 ARHGAP18Q8N392 663 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 FBXW8Q8N3Y1 598 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 FAM110BQ8TC76 370 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 PRKD2Q9BZL6 878 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 MUC3BQ9H195 1237 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 GSTO2Q9H4Y5 243 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 ASB1Q9Y576 335 aa14.81□□□□□ -0.04
SF1-211ENST00000448404 TCAF2A6NFQ2 919 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 CDC7O00311 574 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 SERPINF2P08697 491 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 HMGA1P17096 107 aaKnown RBP14.8□□□□□ -0.04
SF1-211ENST00000448404 ITGB6P18564 788 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 SH3BP2P78314 561 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 PFKPQ01813 784 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 TBCCQ15814 346 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 AGAP9Q5VTM2 703 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 MYLIPQ8WY64 445 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 CDKN2AIPNLQ96HQ2 116 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 SIKE1Q9BRV8 207 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 CINPQ9BW66 212 aaPredicted RBP14.8□□□□□ -0.04
SF1-211ENST00000448404 STN1Q9H668 368 aaKnown RBP14.8□□□□□ -0.04
SF1-211ENST00000448404 FKBPLQ9UIM3 349 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 DNMT3LQ9UJW3 386 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 AGO1Q9UL18 857 aaKnown RBP14.8□□□□□ -0.04
SF1-211ENST00000448404 PCDHGB4Q9UN71 923 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 MED16Q9Y2X0 877 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 TRIM17Q9Y577 477 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 TIMM22Q9Y584 194 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 PCDHGB5Q9Y5G0 923 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 SQORQ9Y6N5 450 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 AP3B1O00203 1094 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 BNIP3LO60238 219 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 NIPSNAP2O75323 286 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 RPLP2P05387 115 aaKnown RBP14.8□□□□□ -0.04
SF1-211ENST00000448404 APOA4P06727 396 aa14.8□□□□□ -0.04
SF1-211ENST00000448404 ALPIP09923 528 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms