RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 VCANP13611 3396 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 ZNF30P17039 623 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 MMP12P39900 470 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 ZNF140P52738 457 aaPredicted RBP19.54■□□□□ 0.72
SGCE-207ENST00000447873 PTPRCAPQ14761 206 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 PIP5KL1Q5T9C9 394 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.54■□□□□ 0.72
SGCE-207ENST00000447873 OR13C4Q8NGS5 318 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 OR13J1Q8NGT2 312 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 DNAJC1Q96KC8 554 aaKnown RBP19.54■□□□□ 0.72
SGCE-207ENST00000447873 NLE1Q9NVX2 485 aaPredicted RBP19.54■□□□□ 0.72
SGCE-207ENST00000447873 FBXL12Q9NXK8 326 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 PLAAQ9Y263 795 aa19.54■□□□□ 0.72
SGCE-207ENST00000447873 DCXO43602 365 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 ALDH1A2O94788 518 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 VAPBO95292 243 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 NUDT17P0C025 328 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 ACADMP11310 421 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 NDUFV2P19404 249 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 PRAMEP78395 509 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 SFSWAPQ12872 951 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 LONRF1Q17RB8 773 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 KIAA0930Q6ICG6 404 aaPredicted RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 TRMT10BQ6PF06 316 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 KIAA1324Q6UXG2 1013 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 UNC5BQ8IZJ1 945 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 HMGB4Q8WW32 186 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 EID2BQ96D98 161 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 CERS2Q96G23 380 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 CCDC77Q9BR77 488 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 FUT8Q9BYC5 575 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 CHRDQ9H2X0 955 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 BPIFA1Q9NP55 256 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 C20orf96Q9NUD7 363 aaPredicted RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 MOCS1Q9NZB8 636 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 IL17CQ9P0M4 197 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 RABGEF1Q9UJ41 708 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 ITM2BQ9Y287 266 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 CCL22O00626 93 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 AREL1O15033 823 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 RPP40O75818 363 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 C7P10643 843 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 GABRG2P18507 467 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 HADHAP40939 763 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 RPS9P46781 194 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 PTSQ03393 145 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 ACVR1Q04771 509 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 IFFO1Q0D2I5 559 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 RALGDSQ12967 914 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 FRG1Q14331 258 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 SMAD1Q15797 465 aaKnown RBP19.53■□□□□ 0.72
SGCE-207ENST00000447873 AGBL4Q5VU57 503 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 CYS1Q717R9 158 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 IQCKQ8N0W5 287 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 PGBD3Q8N328 593 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 HDAC10Q969S8 669 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 TBATAQ96M53 351 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 CYTH2Q99418 400 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 ACSS3Q9H6R3 686 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 IL1RAPL1Q9NZN1 696 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 SERGEFQ9UGK8 458 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 GGT7Q9UJ14 662 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 NCKAP1Q9Y2A7 1128 aa19.53■□□□□ 0.72
SGCE-207ENST00000447873 SCN8AQ9UQD0 1980 aa19.52■□□□□ 0.72
SGCE-207ENST00000447873 SPINT1O43278 529 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 SHBGP04278 402 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 ELFN1P0C7U0 828 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 ERVK-10P10266 1014 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 ARSDP51689 593 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 STAT4Q14765 748 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 ALS2CLQ60I27 953 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 PDPK2PQ6A1A2 396 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 KBTBD6Q86V97 674 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 KCNMB4Q86W47 210 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 SPEM1Q8N4L4 309 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 TSTD1Q8NFU3 115 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 OR6P1Q8NGX9 317 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 OR2W6PQ8NHA6 318 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 CDKL2Q92772 493 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 CDKN2AIPNLQ96HQ2 116 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 WRAP53Q9BUR4 548 aaKnown RBP19.52■□□□□ 0.71
SGCE-207ENST00000447873 ZNF446Q9NWS9 450 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 C2orf42Q9NWW7 574 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 BCCIPQ9P287 314 aaKnown RBP eCLIP19.52■□□□□ 0.71
SGCE-207ENST00000447873 FADS3Q9Y5Q0 445 aa19.52■□□□□ 0.71
SGCE-207ENST00000447873 EXOC1LA0A1B0GW35 172 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 GOLGA8KD6RF30 607 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 H0Y858 1186 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 GOLGA8TH3BQL2 631 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 DCNP07585 359 aaKnown RBP19.51■□□□□ 0.71
SGCE-207ENST00000447873 ARCN1P48444 511 aaKnown RBP19.51■□□□□ 0.71
SGCE-207ENST00000447873 LIG3P49916 1009 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 STC1P52823 247 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 MGAT5Q09328 741 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 KLHL38Q2WGJ6 581 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 KBTBD12Q3ZCT8 623 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 HSP90AA5PQ58FG0 334 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 USP30Q70CQ3 517 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 CTAGE3PQ8IX95 158 aa19.51■□□□□ 0.71
SGCE-207ENST00000447873 ZIM3Q96PE6 472 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms