RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PDHXO00330 501 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 MATN4O95460 622 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 S1PR4O95977 384 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 MT-CO1P00395 513 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 NRG1Q02297 640 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-204ENST00000447182 EML3Q32P44 896 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 ZBED5Q49AG3 693 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 GPR141Q7Z602 305 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 CROCCP3Q8IVE0 287 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 SLC15A3Q8IY34 581 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 CBR4Q8N4T8 237 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 FATE1Q969F0 183 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 FAM210AQ96ND0 272 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 ACBD6Q9BR61 282 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 ABCC13Q9NSE7 274 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 SLC45A1Q9Y2W3 748 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 WASH4PA8MWX3 477 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 PEX11BO96011 259 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 IL10P22301 178 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 CDH15P55291 814 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 ESRRGP62508 458 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 SH3BP2P78314 561 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 PLOD1Q02809 727 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-204ENST00000447182 KIF19Q2TAC6 998 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 COQ5Q5HYK3 327 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 PHYKPLQ8IUZ5 450 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 FAM110BQ8TC76 370 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 LRCH3Q96II8 777 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 GAD1Q99259 594 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 C9orf16Q9BUW7 83 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 ADI1Q9BV57 179 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 LIN28AQ9H9Z2 209 aaKnown RBP19.1■□□□□ 0.65
SDCBP-204ENST00000447182 ZNHIT2Q9UHR6 403 aa19.1■□□□□ 0.65
SDCBP-204ENST00000447182 SAC3D1A6NKF1 404 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 FXYD1O00168 92 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 NR5A2O00482 541 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 TSPAN8P19075 237 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 PSMA4P25789 261 aaKnown RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 RPL9P32969 192 aaKnown RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 FOXM1Q08050 763 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 MERTKQ12866 999 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 SLC36A3Q495N2 470 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 TIGD5Q53EQ6 642 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 MIER2Q8N344 545 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 PTERQ96BW5 349 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 CENPNQ96H22 339 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 SPON1Q9HCB6 807 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 POLR3BQ9NW08 1133 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 TTC24A2A3L6 582 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 E9PAM4 449 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 CDK14O94921 469 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 GNAO1P09471 354 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 CAPN3P20807 821 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 FASP25445 335 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 CCT8P50990 548 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 GALK1P51570 392 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 AFF1P51825 1210 aaKnown RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 PRAMEP78395 509 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 ATP6AP1Q15904 470 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 LDLRAD1Q5T700 205 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 TTC33Q6PID6 262 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 GPR180Q86V85 440 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 ISOC1Q96CN7 298 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 MYRFLQ96LU7 910 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 PKMYT1Q99640 499 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 CD320Q9NPF0 282 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 DNAAF2Q9NVR5 837 aaKnown RBP19.09■□□□□ 0.65
SDCBP-204ENST00000447182 GID8Q9NWU2 228 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 MIOSQ9NXC5 875 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 AURKCQ9UQB9 309 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 PATJQ8NI35 1801 aa19.09■□□□□ 0.65
SDCBP-204ENST00000447182 CROCCQ5TZA2 2017 aa19.08■□□□□ 0.65
SDCBP-204ENST00000447182 ANGPT2O15123 496 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 ODC1P11926 461 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 CD1DP15813 335 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 RENBPP51606 427 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 VPS26BQ4G0F5 336 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 KANK2Q63ZY3 851 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 SPRED1Q7Z699 444 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 SPPL2CQ8IUH8 684 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 SCAMP5Q8TAC9 235 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 NPLOC4Q8TAT6 608 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 SGIP1Q9BQI5 828 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 MUC13Q9H3R2 512 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 NOL6Q9H6R4 1146 aaKnown RBP19.08■□□□□ 0.64
SDCBP-204ENST00000447182 SDR39U1Q9NRG7 319 aaPredicted RBP19.08■□□□□ 0.64
SDCBP-204ENST00000447182 FAM105AQ9NUU6 356 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 CMTM6Q9NX76 183 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 CDH7Q9ULB5 785 aa19.08■□□□□ 0.64
SDCBP-204ENST00000447182 DYTNA2CJ06 578 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 AZIN1O14977 448 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 GPIP06744 558 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 HOXB8P17481 243 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-204ENST00000447182 FDXRP22570 491 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 SLC6A2P23975 617 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 UPP1Q16831 310 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 FAM219BQ5XKK7 198 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 ADGRG5Q8IZF4 528 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 ZNF786Q8N393 782 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 BBS5Q8N3I7 341 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms