RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CXorf21Q9HAI6 301 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 MRPL40Q9NQ50 206 aaKnown RBP14.24□□□□□ -0.13
ERCC3-203ENST00000445889 CNGB3Q9NQW8 809 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 IPO11Q9UI26 975 aaKnown RBP14.24□□□□□ -0.13
ERCC3-203ENST00000445889 MAGED1Q9Y5V3 778 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-203ENST00000445889 F8W810 466 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 HSPA8P11142 646 aaKnown RBP14.24□□□□□ -0.13
ERCC3-203ENST00000445889 GPX3P22352 226 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 GJA5P36382 358 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 POU4F1Q01851 419 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 MERTKQ12866 999 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 BNIP3Q12983 259 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 RPS6KA2Q15349 733 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 GPR180Q86V85 440 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 CNTN4Q8IWV2 1026 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 PTGR2Q8N8N7 351 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-203ENST00000445889 FCRL5Q96RD9 977 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 HBEGFQ99075 208 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 POLR1BQ9H9Y6 1135 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 SQORQ9Y6N5 450 aa14.24□□□□□ -0.13
ERCC3-203ENST00000445889 A0A087WXM4 84 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 A0A087X1B8 175 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 HHLA1C9JL84 531 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 J3QRK9 145 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 GABRDO14764 452 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ANXA9O76027 345 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 SNAP29O95721 258 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 BRCC3P46736 316 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 NUP107P57740 925 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 DSC2Q02487 901 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 TRAP1Q12931 704 aaKnown RBP14.23□□□□□ -0.13
ERCC3-203ENST00000445889 FRG1Q14331 258 aaKnown RBP14.23□□□□□ -0.13
ERCC3-203ENST00000445889 DCLRE1AQ6PJP8 1040 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 RANBP10Q6VN20 620 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ERMP1Q7Z2K6 904 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 PATL1Q86TB9 770 aaKnown RBP14.23□□□□□ -0.13
ERCC3-203ENST00000445889 TOP6BLQ8N6T0 577 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 SMYD1Q8NB12 490 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 LZICQ8WZA0 190 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 SGCDQ92629 289 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 MYLPFQ96A32 169 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 FBXL8Q96CD0 374 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 TBATAQ96M53 351 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ZNF408Q9H9D4 720 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 SEMA4BQ9NPR2 832 aaPredicted RBP14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ANGPT2O15123 496 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 CTSHP09668 335 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 PCNAP12004 261 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 HGFP14210 728 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ADRA1AP35348 466 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
ERCC3-203ENST00000445889 HCAR3P49019 387 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 SLC10A7Q0GE19 358 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ZNF678Q5SXM1 525 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 PM20D1Q6GTS8 502 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 RBM12BQ8IXT5 1001 aaKnown RBP14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ALDH16A1Q8IZ83 802 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 OR13J1Q8NGT2 312 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 MAML3Q96JK9 1138 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 KATNBL1Q9H079 304 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 ARMC7Q9H6L4 198 aa14.23□□□□□ -0.13
ERCC3-203ENST00000445889 SH3PXD2BA1X283 911 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 H0YJX3 145 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CLOCKO15516 846 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CDK14O94921 469 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 KCNE1P15382 129 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 PAMP19021 973 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 PRDX3P30048 256 aaKnown RBP14.22□□□□□ -0.13
ERCC3-203ENST00000445889 PSMD8P48556 350 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 DNAJB13P59910 316 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 TNK2Q07912 1038 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 PPP1R8Q12972 351 aaKnown RBP14.22□□□□□ -0.13
ERCC3-203ENST00000445889 TBPL2Q6SJ96 375 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 ANKRD13AQ8IZ07 590 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 AFAP1L2Q8N4X5 818 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 HM13Q8TCT9 377 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 C1orf50Q9BV19 199 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 TUBB1Q9H4B7 451 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 MATN3O15232 486 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 XPOTO43592 962 aaKnown RBP14.22□□□□□ -0.13
ERCC3-203ENST00000445889 BMP10O95393 424 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 EEF1B2P24534 225 aaKnown RBP14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CCNCP24863 283 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CCR1P32246 355 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 TUBA4AP68366 448 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 POLD3Q15054 466 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-203ENST00000445889 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 ZBED5Q49AG3 693 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 PYCR3Q53H96 274 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 LYSMD3Q7Z3D4 306 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 LIMS2Q7Z4I7 341 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CAMK1DQ8IU85 385 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CASP10Q92851 521 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 B3GALT6Q96L58 329 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 BIRC8Q96P09 236 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 NEU3Q9UQ49 428 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
ERCC3-203ENST00000445889 CXCL11O14625 94 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms