RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 DUPD1Q68J44 220 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 ERAP2Q6P179 960 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 RANBP10Q6VN20 620 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 PCGF5Q86SE9 256 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 LINC00523Q86TU6 105 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 NDUFAF2Q8N183 169 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 HCAR2Q8TDS4 363 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 ITM2CQ9NQX7 267 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 EIF2B3Q9NR50 452 aaKnown RBP17.27■□□□□ 0.36
LIME1-202ENST00000444951 PILRBQ9UKJ0 227 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 WASF3Q9UPY6 502 aa17.27■□□□□ 0.36
LIME1-202ENST00000444951 PCNX2A6NKB5 2137 aa17.27■□□□□ 0.35
LIME1-202ENST00000444951 AKAP13Q12802 2813 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 A0A1W2PQ67 120 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 ANKRD66B4E2M5 251 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 SEC31AO94979 1220 aaKnown RBP17.26■□□□□ 0.35
LIME1-202ENST00000444951 FGF1P05230 155 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 ENGP17813 658 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 HLA-DPA1P20036 260 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 HNF1BP35680 557 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 GRIA4P48058 902 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 SESN2P58004 480 aaPredicted RBP17.26■□□□□ 0.35
LIME1-202ENST00000444951 RPL26P61254 145 aaKnown RBP17.26■□□□□ 0.35
LIME1-202ENST00000444951 RPL6Q02878 288 aaKnown RBP17.26■□□□□ 0.35
LIME1-202ENST00000444951 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 USP45Q70EL2 814 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 SLC41A1Q8IVJ1 513 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 KLHDC8BQ8IXV7 354 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 NAT8LQ8N9F0 302 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 DEFB124Q8NES8 71 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 BLOC1S5Q8TDH9 187 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 IFT81Q8WYA0 676 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 WRAP53Q9BUR4 548 aaKnown RBP17.26■□□□□ 0.35
LIME1-202ENST00000444951 B4GALT6Q9UBX8 382 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 RPL26L1Q9UNX3 145 aaKnown RBP17.26■□□□□ 0.35
LIME1-202ENST00000444951 SHOC2Q9UQ13 582 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 IGF2RP11717 2491 aa17.26■□□□□ 0.35
LIME1-202ENST00000444951 A0A0J9YYE9 177 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 NPIPB15A6NHN6 443 aaPredicted RBP17.25■□□□□ 0.35
LIME1-202ENST00000444951 ZZEF1O43149 2961 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 SUN1O94901 812 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 PCDH8O95206 1070 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 EPOP01588 193 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 TRBC1P01850 177 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 ACSL1P33121 698 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 MAGEA6P43360 314 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 SARNPP82979 210 aaKnown RBP17.25■□□□□ 0.35
LIME1-202ENST00000444951 FOXC1Q12948 553 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 SEPT6Q14141 434 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 DENND5AQ6IQ26 1287 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 SLC23A3Q6PIS1 610 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 USP30Q70CQ3 517 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 TSPAN33Q86UF1 283 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 BBOF1Q8ND07 529 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 OR2I1PQ8NGU4 316 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 PWWP2AQ96N64 755 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 GRHL1Q9NZI5 618 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 WHRNQ9P202 907 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 USP36Q9P275 1121 aaKnown RBP17.25■□□□□ 0.35
LIME1-202ENST00000444951 FZD4Q9ULV1 537 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 SPO11Q9Y5K1 396 aa17.25■□□□□ 0.35
LIME1-202ENST00000444951 CHD6Q8TD26 2715 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3DA0A087WVF3 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3IA0A087WXS9 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3EA0A087X179 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3KA0A087X1G2 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3FA6NER0 549 aaPredicted RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 CAPN8A6NHC0 703 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3LB9A6J9 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 SPINT1O43278 529 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 ZNF217O75362 1048 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 AVILO75366 819 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 CFIP05156 583 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3HP0C7X1 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 CYP2A6P11509 494 aaPredicted RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 CSRP1P21291 193 aaKnown RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 NFKBIAP25963 317 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 ADPRHP54922 357 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 PLTPP55058 493 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TAS2R38P59533 333 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 CDK16Q00536 496 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 CDH17Q12864 832 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 POU6F1Q14863 301 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 MORF4L2Q15014 288 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 SPDYCQ5MJ68 293 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 CERCAMQ5T4B2 595 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3GQ6DHY5 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3CQ6IPX1 549 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 HIBCHQ6NVY1 386 aaPredicted RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 TBC1D3Q8IZP1 549 aaPredicted RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 SCRN2Q96FV2 425 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 TOE1Q96GM8 510 aaKnown RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 NUSAP1Q9BXS6 441 aaKnown RBP17.24■□□□□ 0.35
LIME1-202ENST00000444951 BTBD1Q9H0C5 482 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 CASS4Q9NQ75 786 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 FADS3Q9Y5Q0 445 aa17.24■□□□□ 0.35
LIME1-202ENST00000444951 C1orf232A0A0U1RR37 186 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 CCDC78A2IDD5 438 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 C1QTNF9BB2RNN3 333 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 PLRG1O43660 514 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms