RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SH3RF2Q8TEC5 729 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 INPP5DQ92835 1189 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TMEM175Q9BSA9 504 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 CSNK1G1Q9HCP0 422 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.6□□□□□ -0.71
CALD1-210ENST00000443197 ARL15Q9NXU5 204 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 MOCS1Q9NZB8 636 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 INSL5Q9Y5Q6 135 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 ABHD14A-ACY1A0A1B0GW23 586 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 ZNF840PA6NDX5 716 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 SERPINA6P08185 405 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 UBTFL6P0CB48 400 aaPredicted RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 SLC2A4P14672 509 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 CST5P28325 142 aaPredicted RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 EEF1DP29692 281 aaKnown RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 MGAT3Q09327 533 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 SERINC3Q13530 473 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 PLEKHG4Q58EX7 1191 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TMEM198Q66K66 360 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 DOK6Q6PKX4 331 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 FAM13CQ8NE31 585 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 STYXQ8WUJ0 223 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 MED8Q96G25 268 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 MRGPRX2Q96LB1 330 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 THUMPD3Q9BV44 507 aaKnown RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 VTI1BQ9UEU0 232 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 NPEPPSL1A6NEC2 478 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TMEM233B4DJY2 109 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 UBXN8O00124 270 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 INPP4BO15327 924 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TEX28O15482 410 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 ZBTB14O43829 449 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 SYNCRIPO60506 623 aaKnown RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 SIN3BO75182 1162 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 E2F6O75461 281 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 IPO13O94829 963 aaKnown RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 IL1BP01584 269 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 MSH3P20585 1137 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 GCKP35557 465 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TAZQ16635 292 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TMEM259Q4ZIN3 620 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 MPPE1Q53F39 396 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 RAB41Q5JT25 222 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TPGS2Q68CL5 300 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 KIAA0930Q6ICG6 404 aaPredicted RBP10.6□□□□□ -0.71
CALD1-210ENST00000443197 FBXL19Q6PCT2 694 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 IL27RAQ6UWB1 636 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 CUZD1Q86UP6 607 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 RTP4Q96DX8 246 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 CASD1Q96PB1 797 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 C1orf50Q9BV19 199 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TMEM51Q9NW97 253 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 TMEM248Q9NWD8 314 aa10.6□□□□□ -0.71
CALD1-210ENST00000443197 LOXHD1Q8IVV2 1947 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 B4GALT3O60512 393 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 SEC24DO94855 1032 aaPredicted RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 SIX3O95343 332 aaPredicted RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 PRAMEF1O95521 474 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 ATP5BP06576 529 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 COX4I1P13073 169 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 PKMP14618 531 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 WASP42768 502 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 NIPAL4Q0D2K0 466 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 STARD3Q14849 445 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 LACTB2Q53H82 288 aaPredicted RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 MILR1Q7Z6M3 343 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 PLD4Q96BZ4 506 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 RCN3Q96D15 328 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 CDKN2AIPNLQ96HQ2 116 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 PSMD12O00232 456 aaPredicted RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 RAD51BO15315 384 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 NEK3P51956 506 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 NFYCQ13952 458 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 TSNQ15631 228 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 C6orf89Q6UWU4 347 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 RINLQ6ZS11 566 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 RIPOR1Q6ZS17 1223 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 CPNE9Q8IYJ1 553 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 KLHL23Q8NBE8 558 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 DENND1AQ8TEH3 1009 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 SMG7Q92540 1137 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 OSGEPL1Q9H4B0 414 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 TLE6Q9H808 572 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 GSC2O15499 205 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 NIPSNAP2O75323 286 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 GJB3O75712 270 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 POLR2LP62875 67 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 RARS2Q5T160 578 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 SERPINA13PQ6UXR4 307 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 TRMT11Q7Z4G4 463 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 FAM126BQ8IXS8 530 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 CLDN19Q8N6F1 224 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 ELAC1Q9H777 363 aaKnown RBP10.59□□□□□ -0.71
CALD1-210ENST00000443197 KLQ9UEF7 1012 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 TRAF6Q9Y4K3 522 aa10.59□□□□□ -0.71
CALD1-210ENST00000443197 USP3Q9Y6I4 520 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms