RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 FOXO6A8MYZ6 492 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 LSM1O15116 133 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 UGT1A9O60656 530 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 SNRPAP09012 282 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 CSNK1DP48730 415 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 STK19P49842 368 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 SNRPD1P62314 119 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 MSLNQ13421 630 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 SMAD1Q15797 465 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 CNGA3Q16281 694 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 HSP90AA5PQ58FG0 334 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 CFAP157Q5JU67 520 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 ESRP1Q6NXG1 681 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 KIAA0907Q7Z7F0 614 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 ADIPOR2Q86V24 386 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 YAF2Q8IY57 180 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 RYBPQ8N488 228 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 ST13P5Q8NFI4 369 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 OR2AP1Q8NGE2 309 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 BLOC1S5Q8TDH9 187 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 WFIKKN2Q8TEU8 576 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 WDR60Q8WVS4 1066 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 DYDC1Q8WWB3 177 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 ISG20Q96AZ6 181 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 MYADMQ96S97 322 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 SH3GL1Q99961 368 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 UGT1A7Q9HAW7 530 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 UGT1A10Q9HAW8 530 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 UGT1A8Q9HAW9 530 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 IL1RAPL1Q9NZN1 696 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 EVLQ9UI08 416 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 MTCH2Q9Y6C9 303 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 TRIM24O15164 1050 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 FAM155BO75949 473 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 VAPBO95292 243 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 PAPSS2O95340 614 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 MT-ND3P03897 115 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 DRD4P21917 467 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 CNTFP26441 200 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 NNMTP40261 264 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 TRAF2Q12933 501 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 GEN1Q17RS7 908 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 DGKKQ5KSL6 1271 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 TSTD2Q5T7W7 516 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 GKAP1Q5VSY0 366 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 KIAA0930Q6ICG6 404 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 C22orf39Q6P5X5 142 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 VITQ6UXI7 678 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 MFSD6LQ8IWD5 586 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 PCDH20Q8N6Y1 951 aaKnown RBP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 PAF1Q8N7H5 531 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 LPCAT1Q8NF37 534 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 BRSK1Q8TDC3 778 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 MTBPQ96DY7 904 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 CEP44Q9C0F1 390 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 TNKS2Q9H2K2 1166 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 KCNK9Q9NPC2 374 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 TREX1Q9NSU2 369 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 UBAP1Q9NZ09 502 aa8.11□□□□□ -1.11
CCDC39-201ENST00000442201 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC39-201ENST00000442201 HELZP42694 1942 aaKnown RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 A0A1W2PPC1 479 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 TRIM49D1C9J1S8 452 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 TULP3O75386 442 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PRLP01236 227 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ASLP04424 464 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ATP5BP06576 529 aaKnown RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PDHA1P08559 390 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 MYCLP1P12525 358 aaPredicted RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 LAMP2P13473 410 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CREB1P16220 341 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PORP16435 677 aaPredicted RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 IGFBP4P22692 258 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 GP5P40197 560 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 RGS19P49795 217 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 EPHB1P54762 984 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 BCL2L1Q07817 233 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 FCHO2Q0JRZ9 810 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CNPY1Q3B7I2 92 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ARMC12Q5T9G4 340 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 OR6K2Q8NGY2 324 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PEX13Q92968 403 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CPNE1Q99829 537 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CIPCQ9C0C6 399 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 TTYH1Q9H313 450 aaPredicted RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ATP13A3Q9H7F0 1226 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ECT2Q9H8V3 914 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 NSMCE4AQ9NXX6 385 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 DEC1Q9P2X7 70 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 SLC2A6Q9UGQ3 507 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 SLCO3A1Q9UIG8 710 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 SLC8A2Q9UPR5 921 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 SLC27A6Q9Y2P4 619 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PCDHB9Q9Y5E1 797 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CDH23Q9H251 3354 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 A0A1W2PPM1 405 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 TMEM120BA0PK00 339 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ANKRD66B4E2M5 251 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 BNIP3LO60238 219 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms