RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PIGHQ14442 188 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-219ENST00000440240 HLTFQ14527 1009 aaKnown RBP eCLIP20.77■□□□□ 0.925e-8■■□□□ 14.2
CPNE1-219ENST00000440240 ZSCAN23Q3MJ62 389 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 RALGPS1Q5JS13 557 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 POLNQ7Z5Q5 900 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 JAMLQ86YT9 394 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 CBARPQ8N350 705 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-219ENST00000440240 KIAA1524Q8TCG1 905 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 TTC9Q92623 222 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 NUS1Q96E22 293 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 PHPT1Q9NRX4 125 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-219ENST00000440240 ACSL6Q9UKU0 697 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 ATXN7L1Q9ULK2 861 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-219ENST00000440240 COL6A6A6NMZ7 2263 aa20.77■□□□□ 0.92
CPNE1-219ENST00000440240 A0A1B0GTH6 734 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 TTC24A2A3L6 582 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 B4DGG1 531 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 NVLO15381 856 aaKnown RBP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 ZW10O43264 779 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 MAFKO60675 156 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 PEX11BO96011 259 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 CYP2A6P11509 494 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 PLA2G2AP14555 144 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 IL1R2P27930 398 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 ZFP36L1Q07352 338 aaKnown RBP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 CNGA3Q16281 694 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 E4F1Q66K89 784 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 SPECC1LQ69YQ0 1117 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 SPRED1Q7Z699 444 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 HSPH1Q92598 858 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 SCRN2Q96FV2 425 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 TEX101Q9BY14 249 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 CARS2Q9HA77 564 aaKnown RBP20.76■□□□□ 0.91
CPNE1-219ENST00000440240 NOD2Q9HC29 1040 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 RNF215Q9Y6U7 377 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 PIEZO2Q9H5I5 2752 aa20.76■□□□□ 0.91
CPNE1-219ENST00000440240 PSMD11O00231 422 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 HEXIM1O94992 359 aaKnown RBP20.75■□□□□ 0.91
CPNE1-219ENST00000440240 CPP00450 1065 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 SKILP12757 684 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 CCNB1P14635 433 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 SERPINB6P35237 376 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 ZNF165P49910 485 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 CDH6P55285 790 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 SMTNL2Q2TAL5 461 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 FIGNQ5HY92 759 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 MARC1Q5VT66 337 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 LRRC49Q8IUZ0 686 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 PELI3Q8N2H9 469 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 CCL4L1Q8NHW4 92 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 GPBAR1Q8TDU6 330 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 TEKT4Q8WW24 435 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 NAP1L5Q96NT1 182 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-219ENST00000440240 CSPG4P5Q96PW8 444 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 CMKLR1Q99788 373 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 MGME1Q9BQP7 344 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 GSDMCQ9BYG8 508 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.75■□□□□ 0.91
CPNE1-219ENST00000440240 ETNK2Q9NVF9 386 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 TRNAU1APQ9NX07 287 aaKnown RBP20.75■□□□□ 0.91
CPNE1-219ENST00000440240 TMEM63CQ9P1W3 806 aa20.75■□□□□ 0.91
CPNE1-219ENST00000440240 BZW2Q9Y6E2 419 aaKnown RBP20.75■□□□□ 0.91
CPNE1-219ENST00000440240 LRP4O75096 1905 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 RARAP10276 462 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 KRT10P13645 584 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 HGFP14210 728 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 ILF3Q12906 894 aaKnown RBP eCLIP20.74■□□□□ 0.913e-7■■□□□ 12.3
CPNE1-219ENST00000440240 PEX6Q13608 980 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 DENND2CQ68D51 928 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 HEATR4Q86WZ0 1026 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 NDUFAF2Q8N183 169 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 PGBD5Q8N414 524 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 ATPAF2Q8N5M1 289 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 DTD2Q96FN9 168 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 SPATS2LQ9NUQ6 558 aaKnown RBP20.74■□□□□ 0.91
CPNE1-219ENST00000440240 WDR70Q9NW82 654 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 PISDQ9UG56 409 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 LOXL2Q9Y4K0 774 aa20.74■□□□□ 0.91
CPNE1-219ENST00000440240 ANKRD36A6QL64 1941 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 SERPINC1P01008 464 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 CEACAM5P06731 702 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 TEAD1P28347 426 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 ETV3P41162 512 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 B4GALNT1Q00973 533 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 LY6DQ14210 128 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 NR1I3Q14994 352 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 ARMC12Q5T9G4 340 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 USP45Q70EL2 814 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 PIM3Q86V86 326 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 SFTPA2Q8IWL1 248 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 AKAP7Q9P0M2 348 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-219ENST00000440240 SEPT10Q9P0V9 454 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 IP6K2Q9UHH9 426 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 PPIL1Q9Y3C6 166 aa20.73■□□□□ 0.91
CPNE1-219ENST00000440240 SETXQ7Z333 2677 aaKnown RBP20.72■□□□□ 0.91
CPNE1-219ENST00000440240 PGLSO95336 258 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 CPNE6O95741 557 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 FGF1P05230 155 aa20.72■□□□□ 0.91
CPNE1-219ENST00000440240 TCF4P15884 667 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms