RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 GOLGA8CPA6NN73 597 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 UGT1A9O60656 530 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ERVK-10P10266 1014 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ALADP13716 330 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.8
CBX5-202ENST00000439541 LHCGRP22888 699 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ARNTP27540 789 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 TNFRSF4P43489 277 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ARSDP51689 593 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 RAD51Q06609 339 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ENPP2Q13822 863 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ELAVL3Q14576 367 aaKnown RBP10.03□□□□□ -0.8
CBX5-202ENST00000439541 KBTBD12Q3ZCT8 623 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 TMEM135Q86UB9 458 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 MMAAQ8IVH4 418 aaKnown RBP10.03□□□□□ -0.8
CBX5-202ENST00000439541 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 PNPLA1Q8N8W4 532 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 KDM1BQ8NB78 822 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 TXNDC5Q8NBS9 432 aaKnown RBP10.03□□□□□ -0.8
CBX5-202ENST00000439541 OR13J1Q8NGT2 312 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 GIMAP7Q8NHV1 300 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 PIP4K2CQ8TBX8 421 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 OR8D1Q8WZ84 308 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ARRDC3Q96B67 414 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 EID2BQ96D98 161 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 NECAB3Q96P71 396 aaPredicted RBP10.03□□□□□ -0.8
CBX5-202ENST00000439541 FAM129BQ96TA1 746 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 PPCSQ9HAB8 311 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 UGT1A7Q9HAW7 530 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 UGT1A10Q9HAW8 530 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 UGT1A8Q9HAW9 530 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ARHGEF3Q9NR81 526 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 GGT7Q9UJ14 662 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 SORCS3Q9UPU3 1222 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
CBX5-202ENST00000439541 ZNF711Q9Y462 761 aa10.03□□□□□ -0.8
CBX5-202ENST00000439541 ATG2BQ96BY7 2078 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 A0A0J9YYE9 177 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 EXOC1LA0A1B0GW35 172 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 HEATR9A2RTY3 570 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 KRBA1A5PL33 1030 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 MROH6A6NGR9 719 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 OR51F1A6NGY5 319 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 CAPN8A6NHC0 703 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 AP3B1O00203 1094 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 GPR39O43194 453 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 FAM155BO75949 473 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 USP1O94782 785 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 IL1BP01584 269 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 TRBC1P01850 177 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 POLBP06746 335 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 DRD1P21728 446 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 ADRA1DP25100 572 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 GCAP28676 217 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 PHBP35232 272 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 HNF1BP35680 557 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 ZNF140P52738 457 aaPredicted RBP10.02□□□□□ -0.81
CBX5-202ENST00000439541 ELF3P78545 371 aaPredicted RBP10.02□□□□□ -0.81
CBX5-202ENST00000439541 PPARDQ03181 441 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 CCINQ13939 588 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 CNGA3Q16281 694 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 SPANXN3Q5MJ09 141 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 TSTD2Q5T7W7 516 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 RASSF3Q86WH2 238 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 TTC30BQ8N4P2 665 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
CBX5-202ENST00000439541 RPLP0P6Q8NHW5 317 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 CKAP2Q8WWK9 683 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 ZNF641Q96N77 438 aaPredicted RBP10.02□□□□□ -0.81
CBX5-202ENST00000439541 RANBP9Q96S59 729 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 ACSS3Q9H6R3 686 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 SUDS3Q9H7L9 328 aaPredicted RBP10.02□□□□□ -0.81
CBX5-202ENST00000439541 CD248Q9HCU0 757 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 BPIFA1Q9NP55 256 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 CD320Q9NPF0 282 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 TREX1Q9NSU2 369 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 PRKAG3Q9UGI9 489 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 PPM1HQ9ULR3 514 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 ARL2BPQ9Y2Y0 163 aa10.02□□□□□ -0.81
CBX5-202ENST00000439541 MTF2Q9Y483 593 aaPredicted RBP10.02□□□□□ -0.81
CBX5-202ENST00000439541 CKAP5Q14008 2032 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 C1orf232A0A0U1RR37 186 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 TSPAN11A1L157 253 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 FOXO6A8MYZ6 492 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 POC1B-GALNT4F8VUJ3 575 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 SPINT1O43278 529 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 VAPBO95292 243 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 HOXB2P14652 356 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 BRAFP15056 766 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 TARSP26639 723 aaKnown RBP10.01□□□□□ -0.81
CBX5-202ENST00000439541 NTSR1P30989 418 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 STX2P32856 288 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 ABCG1P45844 678 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 SPRED3Q2MJR0 410 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 ZNF805Q5CZA5 627 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 CTAGE3PQ8IX95 158 aa10.01□□□□□ -0.81
CBX5-202ENST00000439541 PPM1NQ8N819 430 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms