RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 NANOGQ9H9S0 305 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 MRPL40Q9NQ50 206 aaKnown RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 FLRT1Q9NZU1 646 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 TRAF6Q9Y4K3 522 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ZSWIM8A7E2V4 1837 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 KRBA1A5PL33 1030 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 A8MU76 341 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ARPC2O15144 300 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 KPNA6O60684 536 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 SNAI1O95863 264 aaPredicted RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ATP5F1P24539 256 aaPredicted RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 IGFBP6P24592 240 aaPredicted RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 MAPRE2Q15555 327 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 CCL14Q16627 93 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 PRAMEF19Q5SWL8 479 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 DHRSXQ8N5I4 330 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 SEPT8Q92599 483 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 TAMM41Q96BW9 452 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 GLT1D1Q96MS3 346 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 MUS81Q96NY9 551 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 SEZ6LQ9BYH1 1024 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 RMI1Q9H9A7 625 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 PTBP2Q9UKA9 531 aaKnown RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ERGIC3Q9Y282 383 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 SUPT7LO94864 414 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 OPRL1P41146 370 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 BCAT1P54687 386 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 FOXA1P55317 472 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TPI1P60174 286 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 MTA1Q13330 715 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 ZNF420Q8TAQ5 688 aaPredicted RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 KCNA7Q96RP8 456 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 MRPL57Q9BQC6 102 aaKnown RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 LHPPQ9H008 270 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 AKTIPQ9H8T0 292 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 LRRC4Q9HBW1 653 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 MYLKQ15746 1914 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 FXYD1O00168 92 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 SYNCRIPO60506 623 aaKnown RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 XYLBO75191 536 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 BCL10O95999 233 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 INSRRP14616 1297 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 IL10P22301 178 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 GPX3P22352 226 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 SHMT2P34897 504 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 NPY2RP49146 381 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 PRKAA2P54646 552 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 CDH17Q12864 832 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 SEPT6Q14141 434 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 NIPAL1Q6NVV3 410 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 LARP4Q71RC2 724 aaKnown RBP eCLIP13.57□□□□□ -0.243e-11■■■■□ 24.2
PCNX3-202ENST00000439247 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TMEM74Q96NL1 305 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 H3BMM5 538 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 MAN1A2O60476 641 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 RASAL1O95294 804 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 C22orf31O95567 290 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TXNP10599 105 aaKnown RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 IDO1P14902 403 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 IL7RP16871 459 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 CAPGP40121 348 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 CASP2P42575 452 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TM4SF4P48230 202 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TMEM214Q6NUQ4 689 aaKnown RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 TMCO5AQ8N6Q1 288 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 VPS33AQ96AX1 596 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 C9orf16Q9BUW7 83 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 KATNBL1Q9H079 304 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
PCNX3-202ENST00000439247 SLAMF8Q9P0V8 285 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 DAPK2Q9UIK4 370 aa13.57□□□□□ -0.24
PCNX3-202ENST00000439247 SNAP91O60641 907 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 AXLP30530 894 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 ARCN1P48444 511 aaKnown RBP13.56□□□□□ -0.24
PCNX3-202ENST00000439247 TNFAIP2Q03169 654 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 SPCS2Q15005 226 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 TRIM16LQ309B1 348 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 TECRLQ5HYJ1 363 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 OR13F1Q8NGS4 319 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 NPY6RQ99463 290 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 HERC2P3Q9BVR0 1158 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 KIFC1Q9BW19 673 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 ALG9Q9H6U8 611 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 RIC8BQ9NVN3 520 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 GID8Q9NWU2 228 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 SMPD3Q9NY59 655 aaPredicted RBP13.56□□□□□ -0.24
PCNX3-202ENST00000439247 KLK14Q9P0G3 267 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 TSC22D4Q9Y3Q8 395 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 H0Y858 1186 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 HUS1O60921 280 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms