RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SLC35F5Q8WV83 523 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 RAB40AQ8WXH6 277 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 ATOH1Q92858 354 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 SH3KBP1Q96B97 665 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 CAPNS2Q96L46 248 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 FUZQ9BT04 418 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 HEMGNQ9BXL5 484 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 SEZ6LQ9BYH1 1024 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 ENTPD7Q9NQZ7 604 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 GRHL1Q9NZI5 618 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 PEMTQ9UBM1 199 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 FBXO40Q9UH90 709 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 PROCRQ9UNN8 238 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 CNPY2Q9Y2B0 182 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 CLDN16Q9Y5I7 305 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 CYP46A1Q9Y6A2 500 aa3.47□□□□□ -1.85
HMGB3P12-201ENST00000438745 USP6P35125 1406 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 CEP162Q5TB80 1403 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 LRRC37A3O60309 1634 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 PABPN1LA6NDY0 278 aaKnown RBP3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 LIASO43766 372 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 PPP1R3DO95685 299 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 TBX18O95935 607 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZNF12P17014 697 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 THPOP40225 353 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 HARS2P49590 506 aaKnown RBP3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 SEC61A1P61619 476 aaKnown RBP3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 EFNB1P98172 346 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 MPP1Q00013 466 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 KIF5AQ12840 1032 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 TRAF2Q12933 501 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 TRAF3Q13114 568 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 DDX10Q13206 875 aaKnown RBP3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 NFATC4Q14934 902 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 IL20RBQ6UXL0 311 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 RSRC2Q7L4I2 434 aaKnown RBP3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 R3HCC1LQ7Z5L2 792 aaKnown RBP3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 TMC8Q8IU68 726 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 LURAP1LQ8IV03 231 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 CNTROBQ8N137 903 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 CPXM2Q8N436 756 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 OR4N2Q8NGD1 307 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 RASSF8Q8NHQ8 419 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 SPATA3Q8NHX4 192 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 UCMAQ8WVF2 138 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 APOLD1Q96LR9 279 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 NUF2Q9BZD4 464 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 JMJD4Q9H9V9 463 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 PCDHB16Q9NRJ7 776 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 ATP8A2Q9NTI2 1148 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 NAALADL1Q9UQQ1 740 aa3.46□□□□□ -1.86
HMGB3P12-201ENST00000438745 PASKQ96RG2 1323 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 EEA1Q15075 1411 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 MEGF6O75095 1541 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 COL24A1Q17RW2 1714 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 SBF2Q86WG5 1849 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 TEX13CA0A0J9YWL9 993 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 TEX22C9J3V5 150 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 FAM157AC9JC47 383 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 SNAP23O00161 211 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 KIF1CO43896 1103 aaKnown RBP3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 CLDN7O95471 211 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 SERPINC1P01008 464 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 RFC1P35251 1148 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 DPP6P42658 865 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 GPD2P43304 727 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 AMTP48728 403 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 ARSFP54793 590 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 CDH12P55289 794 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 UFM1P61960 85 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 ADORA2A-AS1P86434 159 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 CAMK1Q14012 370 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 RPE65Q16518 533 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 BAK1Q16611 211 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 TSTQ16762 297 aaKnown RBP3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZNF766Q5HY98 468 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 FAAH2Q6GMR7 532 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 FAM180BQ6P0A1 224 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 H1FNTQ75WM6 255 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 TSPYL6Q8N831 410 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 PPHLN1Q8NEY8 458 aaKnown RBP3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 GDPD5Q8WTR4 605 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 KLHL15Q96M94 604 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 TM6SF1Q9BZW5 370 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 LHPPQ9H008 270 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 USP44Q9H0E7 712 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 CDT1Q9H211 546 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 BEX4Q9NWD9 120 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 BABAM1Q9NWV8 329 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 AASSQ9UDR5 926 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 SLC45A1Q9Y2W3 748 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 CUL9Q8IWT3 2517 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 ADAMTS7Q9UKP4 1686 aa3.45□□□□□ -1.86
HMGB3P12-201ENST00000438745 SPATA31E1Q6ZUB1 1445 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 IGHV4-28A0A0C4DH34 117 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 C17orf113A0A1B0GUU1 675 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 A0A1W2PPH5 198 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 ASAP2O43150 1006 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 TACC1O75410 805 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms