RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GRIK2Q13002 908 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 PLCB4Q15147 1175 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 COL28A1Q2UY09 1125 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 SIGIRRQ6IA17 410 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 IKBIPQ70UQ0 350 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 MTSS1LQ765P7 747 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 CACNA2D4Q7Z3S7 1137 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 TICAM1Q8IUC6 712 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 SLC35F3Q8IY50 421 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 HACE1Q8IYU2 909 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 DSELQ8IZU8 1212 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 ELP5Q8TE02 316 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 SCFD2Q8WU76 684 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 ERGIC1Q969X5 290 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 PHF21BQ96EK2 531 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 KXD1Q9BQD3 176 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 SYNCQ9H7C4 482 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 MKKSQ9NPJ1 570 aaPredicted RBP3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 HINT3Q9NQE9 182 aaKnown RBP3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 RRP7BPQ9NSQ0 103 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 BLOC1S4Q9NUP1 217 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 ABI3Q9P2A4 366 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 SWAP70Q9UH65 585 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 MAU2Q9Y6X3 613 aa3.85□□□□□ -1.79
LSM1P1-201ENST00000438629 CKAP5Q14008 2032 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 ZIC3O60481 467 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 DAB1O75553 588 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 ALPLP05186 524 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 PTMSP20962 102 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 MAOAP21397 527 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 PIGAP37287 484 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 PBX3P40426 434 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 FOXG1P55316 489 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 LINC00205P59089 165 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 NAB2Q15742 525 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 ALG11Q2TAA5 492 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 ITPRIPL1Q6GPH6 555 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 TTI2Q6NXR4 508 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 FAM122CQ6P4D5 195 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 FBXO46Q6PJ61 603 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 CYP20A1Q6UW02 462 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 TAOK1Q7L7X3 1001 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 HAPLN4Q86UW8 402 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 FJX1Q86VR8 437 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 RNF168Q8IYW5 571 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 SPATA6LQ8N4H0 392 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 C1orf131Q8NDD1 294 aaKnown RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 B4GALNT2Q8NHY0 566 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 MOAP1Q96BY2 351 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 MTBPQ96DY7 904 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 CCDC34Q96HJ3 373 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 THOC3Q96J01 351 aaKnown RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 SEPT5Q99719 369 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 CHCHD6Q9BRQ6 235 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 ITPAQ9BY32 194 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 C17orf75Q9HAS0 396 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 SCPEP1Q9HB40 452 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 DDX4Q9NQI0 724 aaKnown RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 UBA2Q9UBT2 640 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 CNOT8Q9UFF9 292 aaKnown RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 FBXO2Q9UK22 296 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 CORO1CQ9ULV4 474 aaPredicted RBP3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 CDC14AQ9UNH5 594 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 TNFRSF18Q9Y5U5 241 aa3.84□□□□□ -1.79
LSM1P1-201ENST00000438629 GOLGA6L9A6NEM1 432 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 SNAP23O00161 211 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 AP3D1O14617 1153 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 TIMM23O14925 209 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 HCRTR2O43614 444 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 PTP4A3O75365 173 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 JRKO75564 520 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 NKX2-2O95096 273 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 NTN1O95631 604 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 T-ENOLP0DO92 83 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 HOXC9P31274 260 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 LTBQ06643 244 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 LRMPQ12912 555 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 PDE1CQ14123 709 aaPredicted RBP3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 MED22Q15528 200 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 C2orf68Q2NKX9 166 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 AMZ1Q400G9 498 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 SLC45A4Q5BKX6 768 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 CXorf66Q5JRM2 361 aaPredicted RBP3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 KLHL35Q6PF15 583 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 CLEC4GQ6UXB4 293 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 KRBA2Q6ZNG9 492 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 ZDHHC17Q8IUH5 632 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 TEX11Q8IYF3 940 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 TMTC2Q8N394 836 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 CLIP4Q8N3C7 705 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 NME8Q8N427 588 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 ADAMTS14Q8WXS8 1223 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 WASF1Q92558 559 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 PERPQ96FX8 193 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 PGAM5Q96HS1 289 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 CMTM3Q96MX0 182 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 TKTL2Q9H0I9 626 aa3.83□□□□□ -1.8
LSM1P1-201ENST00000438629 SMARCAD1Q9H4L7 1026 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms