RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PLEKHA7Q6IQ23 1121 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 DLK2Q6UY11 383 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 MTSS1LQ765P7 747 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 FJX1Q86VR8 437 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 ADSSL1Q8N142 457 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 CCDC89Q8N998 374 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 CLEC18CQ8NCF0 446 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 THOC3Q96J01 351 aaKnown RBP3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 ZNF479Q96JC4 524 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 TREX2Q9BQ50 279 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 FAM110AQ9BQ89 295 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 IFIH1Q9BYX4 1025 aaKnown RBP3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 TKTL2Q9H0I9 626 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 ERVK-11Q9UQG0 969 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 KCNE2Q9Y6J6 123 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 STON1Q9Y6Q2 735 aa3.74□□□□□ -1.81
TRAPPC13-204ENST00000438419 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 A0A0U1RQJ8 604 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 J3KR12 359 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 IFNL4K9M1U5 179 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 HSPA12AO43301 675 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 HNRNPCL1O60812 293 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 PTP4A3O75365 173 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GAGE7O76087 117 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GAGE12FP0CL80 117 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GAGE12GP0CL81 117 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GAGE12IP0CL82 117 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 LAMP2P13473 410 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 KRT10P13645 584 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 HNRNPH1P31943 449 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 PBX3P40426 434 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 PIP4K2AP48426 406 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 SORDQ00796 357 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 ECT2LQ008S8 904 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 LTBQ06643 244 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 CSTF3Q12996 717 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GAGE1Q13065 139 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GAGE4Q13068 117 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 MED22Q15528 200 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 KRT24Q2M2I5 525 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 COL28A1Q2UY09 1125 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 MMEL1Q495T6 779 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 FBXO46Q6PJ61 603 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 TSSK4Q6SA08 328 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 QSOX2Q6ZRP7 698 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 IKBIPQ70UQ0 350 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 MEPCEQ7L2J0 689 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 ZC3HC1Q86WB0 502 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 WDR63Q8IWG1 891 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 CLIP4Q8N3C7 705 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 NEXN-AS1Q8NBZ9 246 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 TMEM116Q8NCL8 245 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 USP6NLQ92738 828 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 PERPQ96FX8 193 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 SLC41A2Q96JW4 573 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 TMEM47Q9BQJ4 181 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 NUDT16L1Q9BRJ7 211 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 ZPBPQ9BS86 351 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 HIPK2Q9H2X6 1198 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 GHITMQ9H3K2 345 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 MUC13Q9H3R2 512 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 ESRP2Q9H6T0 727 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 KIF9Q9HAQ2 790 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 SCPEP1Q9HB40 452 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 FBRSL1Q9HCM7 1045 aaKnown RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 MKKSQ9NPJ1 570 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 EHD2Q9NZN4 543 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 SELENONQ9NZV5 590 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 DLGAP2Q9P1A6 1054 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 ABI3Q9P2A4 366 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 CORO1CQ9ULV4 474 aaPredicted RBP3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 CDC14AQ9UNH5 594 aa3.73□□□□□ -1.81
TRAPPC13-204ENST00000438419 FAM237BA0A1B0GVD1 139 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 LINC01553A4QN01 128 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 GTPBP1O00178 669 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 FIBPO43427 364 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 ZIC3O60481 467 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 IPO7O95373 1038 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 HSP90AA1P07900 732 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 ACAA1P09110 424 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 PLA2G2AP14555 144 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 ZNF182P17025 639 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 CDH2P19022 906 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 MAOAP21397 527 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 PPARGP37231 505 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 NAE1Q13564 534 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 FRG1Q14331 258 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 KCTD2Q14681 263 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 METTL2BQ6P1Q9 378 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 CRELD2Q6UXH1 353 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 SPATA2LQ8IUW3 424 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 DSELQ8IZU8 1212 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 TTC39CQ8N584 583 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 FRMD1Q8N878 549 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 CREB3L4Q8TEY5 395 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 MMABQ96EY8 250 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 METTL2AQ96IZ6 378 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 TMEM68Q96MH6 324 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 SH3GL2Q99962 352 aa3.72□□□□□ -1.81
TRAPPC13-204ENST00000438419 TBC1D29Q9UFV1 150 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms