RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 HID1Q8IV36 788 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 CADM2Q8N3J6 435 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 LNX2Q8N448 690 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 OR4K2Q8NGD2 314 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 PPCDCQ96CD2 204 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 CLEC4MQ9H2X3 399 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 TMEM216Q9P0N5 145 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 FCF1Q9Y324 198 aaKnown RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 BCL9O00512 1426 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 SLC28A1O00337 649 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 TPST2O60704 377 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 FAM155BO75949 473 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 CST1P01037 141 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 INO80DQ53TQ3 878 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 KYAT3Q6YP21 454 aaKnown RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 PLPPR4Q7Z2D5 763 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 MCEMP1Q8IX19 187 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 FBXO15Q8NCQ5 510 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-206ENST00000438092 COPS8Q99627 209 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 C9orf16Q9BUW7 83 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 GMPPBQ9Y5P6 360 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 UBIAD1Q9Y5Z9 338 aa10.35□□□□□ -0.75
SHPRH-206ENST00000438092 C2orf71A6NGG8 1288 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 RHPN2P1A8MT19 583 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 GCATO75600 419 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SELPP16109 830 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 NELFEP18615 380 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 CDH3P22223 829 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 DLG2Q15700 870 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 PMF1Q6P1K2 205 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 CHST15Q7LFX5 561 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 ALYREFQ86V81 257 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 AUTS2Q8WXX7 1259 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SLC25A23Q9BV35 468 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 NUAK2Q9H093 628 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MED26O95402 600 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MLYCDO95822 493 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 CLCN5P51795 746 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 PGDP52209 483 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 PRKAA2P54646 552 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MBTD1Q05BQ5 628 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SLC20A2Q08357 652 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 PYDC2Q56P42 97 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 C2orf27AQ580R0 203 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 GDF6Q6KF10 455 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 DPEP3Q9H4B8 488 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 KCNMB3Q9NPA1 279 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 INTS7Q9NVH2 962 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 FBXW2Q9UKT8 454 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 ZNF490Q9ULM2 529 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 ITGB5P18084 799 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 ZNF132P52740 706 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 ZNF155Q12901 538 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 INTS11Q5TA45 600 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 LYPLAL1Q5VWZ2 237 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 ARMCX6Q7L4S7 300 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SETD9Q8NE22 299 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 HNRNPLLQ8WVV9 542 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 DNASE1L2Q92874 299 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 CAVIN3Q969G5 261 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 EXOSC8Q96B26 276 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 QKIQ96PU8 341 aaKnown RBP eCLIP10.34□□□□□ -0.752e-37■■■■■ 280.4
SHPRH-206ENST00000438092 NPAS2Q99743 824 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 DBTP11182 482 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SLC6A2P23975 617 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SLC5A3P53794 718 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 UGT2B15P54855 530 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 WNT3AP56704 352 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 GTF2BQ00403 316 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 FMO1Q01740 532 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 RTL3Q8N8U3 475 aaKnown RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SHC3Q92529 594 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 RNF31Q96EP0 1072 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 TSSK3Q96PN8 268 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SLC38A2Q96QD8 506 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 BHLHE41Q9C0J9 482 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 XPR1Q9UBH6 696 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MORF4L1Q9UBU8 362 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MYRFQ9Y2G1 1151 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MTF2Q9Y483 593 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MATKP42679 507 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 OMPP47874 163 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 GFOD2Q3B7J2 385 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 SPANXN2Q5MJ10 180 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 RNF19BQ6ZMZ0 732 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 AMIGO2Q86SJ2 522 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 HSFY1Q96LI6 401 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 GPER1Q99527 375 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 KCNE2Q9Y6J6 123 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 FAM92AA1XBS5 289 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 PER2O15055 1255 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 EPHB6O15197 1021 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 MGRN1O60291 552 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 PRKCGP05129 697 aa10.34□□□□□ -0.75
SHPRH-206ENST00000438092 TIE1P35590 1138 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms