RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PDZD7Q9H5P4 517 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 C3orf14Q9HBI5 128 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 CORO1CQ9ULV4 474 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GLYATL1P3A0A0U1RQE8 302 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 TMEM191CA6NGB0 347 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 CILPO75339 1184 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 GSSP48637 474 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 SLC4A9Q96Q91 983 aa15.88■□□□□ 0.13
PTPN13-204ENST00000436978 SEPT4O43236 478 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 TTKP33981 857 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 NDUFA9Q16795 377 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 INTS6LQ5JSJ4 861 aaKnown RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ZNF57Q68EA5 555 aaPredicted RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 APTXQ7Z2E3 356 aaKnown RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 IZUMO1Q8IYV9 350 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 HDAC7Q8WUI4 952 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 HMG20AQ9NP66 347 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PCDHGC3Q9UN70 934 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PTPRJQ12913 1337 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 USP2O75604 605 aaPredicted RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 FGBP02675 491 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 SPAM1P38567 509 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 NAGLUP54802 743 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ACBD6Q9BR61 282 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 RHOJQ9H4E5 214 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 EXD2Q9NVH0 621 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 RBM47A0AV96 593 aaKnown RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 BMP7P18075 431 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 HNRNPH3P31942 346 aaKnown RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PTPN9P43378 593 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 CDH4P55283 916 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 UBE2R2Q712K3 238 aaPredicted RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 QKIQ96PU8 341 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 C3orf18Q9UK00 162 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 NUDT17P0C025 328 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ASMTP46597 345 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PRKG2Q13237 762 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 NEDD8Q15843 81 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 SLC44A4Q53GD3 710 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 OFCC1Q8IZS5 231 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 GPR156Q8NFN8 814 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 TEFMQ96QE5 360 aaKnown RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 FNDC11Q9BVV2 318 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 LMAN2LQ9H0V9 348 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 IKZF3Q9UKT9 509 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 AZIN1O14977 448 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 TAF10Q12962 218 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 DEC1Q9P2X7 70 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ZMYND8Q9ULU4 1186 aaPredicted RBP15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ERVK-21P61565 698 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ARSHQ5FYA8 562 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 ARMC8Q8IUR7 673 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 FBXO30Q8TB52 745 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 GINS4Q9BRT9 223 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PCDHAC2Q9Y5I4 1007 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 S100GP29377 79 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 UGT1A5P35504 534 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 XYLT1Q86Y38 959 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PPCDCQ96CD2 204 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 PANX1Q96RD7 426 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 HEBP2Q9Y5Z4 205 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 STON1Q9Y6Q2 735 aa15.87■□□□□ 0.13
PTPN13-204ENST00000436978 AP3D1O14617 1153 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 TSPAN1O60635 241 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 MAXP61244 160 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 C12orf50Q8NA57 414 aaPredicted RBP15.86■□□□□ 0.13
PTPN13-204ENST00000436978 STK32AQ8WU08 396 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 PCDH18Q9HCL0 1135 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 CLIC5Q9NZA1 410 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 GOLGA4Q13439 2230 aaKnown RBP15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ARL5CA6NH57 179 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 MCIDASD6RGH6 385 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ARL2P36404 184 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 GRIA3P42263 894 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ATP12AP54707 1039 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ATAT1Q5SQI0 421 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 OR10G6Q8NH81 332 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 FNIP1Q8TF40 1166 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 AP3S1Q92572 193 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 SLC47A1Q96FL8 570 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 RIPOR3Q96MK2 946 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 SGK2Q9HBY8 427 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 GLOD4Q9HC38 313 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 NECTIN3Q9NQS3 549 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 DUS2Q9NX74 493 aaKnown RBP15.86■□□□□ 0.13
PTPN13-204ENST00000436978 RHOQP17081 205 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ITGAXP20702 1163 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 SLC5A3P53794 718 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 CACNA2D1P54289 1103 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 GJD3Q8N144 294 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ZBTB10Q96DT7 871 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 CLIP3Q96DZ5 547 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 MUC13Q9H3R2 512 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 H3BM21 787 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 OGNP20774 298 aaKnown RBP15.86■□□□□ 0.13
PTPN13-204ENST00000436978 PSMD8P48556 350 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
PTPN13-204ENST00000436978 ECM1Q16610 540 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms