RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 TRA2AQ13595 282 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 IGFBP7Q16270 282 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 CLPPQ16740 277 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 NKAIN2Q5VXU1 208 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 DENND2CQ68D51 928 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 SLC30A9Q6PML9 568 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 C17orf82Q86X59 251 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 LURAP1LQ8IV03 231 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 AGBL5Q8NDL9 886 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 CCDC112Q8NEF3 446 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 PATE1Q8WXA2 126 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 ECHDC3Q96DC8 303 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 CDH19Q9H159 772 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 GANQ9H2C0 597 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 PHPT1Q9NRX4 125 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 GPATCH2LQ9NWQ4 482 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 SLC39A1Q9NY26 324 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 DONSONQ9NYP3 566 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 DOPEY2Q9Y3R5 2298 aa11.61□□□□□ -0.55
CHRNA1-207ENST00000435083 RAD1O60671 282 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 FUCA1P04066 466 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 NTRK1P04629 796 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 CEACAM5P06731 702 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 GPR3P46089 330 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 KLK7P49862 253 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 SCNN1BP51168 640 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 ZNF143P52747 638 aaPredicted RBP11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 GSCP56915 257 aaPredicted RBP11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 NR1D2Q14995 579 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 CLEC16AQ2KHT3 1053 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 DPCR1Q3MIW9 517 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 TCP11X2Q5H9J9 407 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 DNAJC24Q6P3W2 148 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 HEATR4Q86WZ0 1026 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 FAM129CQ86XR2 697 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 NRSN1Q8IZ57 195 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 NUS1Q96E22 293 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 MCEEQ96PE7 176 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 ZMYND15Q9H091 742 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 VPS16Q9H269 839 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 SP110Q9HB58 689 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 FAM207AQ9NSI2 230 aaPredicted RBP11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 SEPT11Q9NVA2 429 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 OCIAD1Q9NX40 245 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 B4GALT6Q9UBX8 382 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 PTPN13Q12923 2485 aa11.6□□□□□ -0.55
CHRNA1-207ENST00000435083 GOLGA6CA6NDK9 693 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 GOLGA6BA6NDN3 693 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 ZNF891A8MT65 544 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 DFFAO00273 331 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 PPM1DO15297 605 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 DAPK3O43293 454 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 GOLGA6DP0CG33 693 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 DESP17661 470 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 AIF1P55008 147 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 RPL7AP62424 266 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 FOXK1P85037 733 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 CTBSQ01459 385 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 SYCP1Q15431 976 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 NAGSQ8N159 534 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 OR4D9Q8NGE8 314 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 COQ10AQ96MF6 247 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 CATSPER2Q96P56 530 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 CNPY3Q9BT09 278 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 DDA1Q9BW61 102 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 TEX101Q9BY14 249 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 ASPSCR1Q9BZE9 553 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 ZNF71Q9NQZ8 489 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 TRNAU1APQ9NX07 287 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 GOLGA6AQ9NYA3 693 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 TUBD1Q9UJT1 453 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 ANAPC2Q9UJX6 822 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 SUFUQ9UMX1 484 aa11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 UBR5O95071 2799 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-207ENST00000435083 IGHV1OR21-1A0A087WYE8 117 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 EFCAB7A8K855 629 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 EEF2KO00418 725 aaKnown RBP11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 TRAFD1O14545 582 aaPredicted RBP11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 EPHB6O15197 1021 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 NKX2-8O15522 239 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 PRKAR1AP10644 381 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 GP1BBP13224 206 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 HTR7P34969 479 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 ADCY8P40145 1251 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 CASRP41180 1078 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 POLD2P49005 469 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 JAM2P57087 298 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 UBE2HP62256 183 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 NSUN2Q08J23 767 aaKnown RBP eCLIP11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 CNGA3Q16281 694 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 DCAF12Q5T6F0 453 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 DCUN1D2Q6PH85 259 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 MON1BQ7L1V2 547 aa11.58□□□□□ -0.55
CHRNA1-207ENST00000435083 C9orf43Q8TAL5 461 aaPredicted RBP11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms