RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 TBR1Q16650 682 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 TCP11X2Q5H9J9 407 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 CFAP58Q5T655 872 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 FAM72AQ5TYM5 149 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 NAA35Q5VZE5 725 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 FAM72DQ6L9T8 149 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 PNCKQ6P2M8 343 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 WDR59Q6PJI9 974 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 LIPIQ6XZB0 460 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 DPPA4Q7L190 304 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 TAF8Q7Z7C8 310 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 SRLQ86TD4 932 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 FAM72BQ86X60 149 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 NDUFAF2Q8N183 169 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 AVL9Q8NBF6 648 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 KYQ8NBH2 561 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 AGBL5Q8NDL9 886 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 OR4D9Q8NGE8 314 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 TSACCQ96A04 125 aaPredicted RBP8.31□□□□□ -1.08
CDH13-203ENST00000431540 PSKH2Q96QS6 385 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 SELENOOQ9BVL4 669 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 TEX101Q9BY14 249 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 EPB41L1Q9H4G0 881 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 PDFQ9HBH1 243 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 PCDH12Q9NPG4 1184 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 METTL5Q9NRN9 209 aaKnown RBP8.31□□□□□ -1.08
CDH13-203ENST00000431540 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 PHPT1Q9NRX4 125 aaPredicted RBP8.31□□□□□ -1.08
CDH13-203ENST00000431540 ADAM22Q9P0K1 906 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 LHX3Q9UBR4 397 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 FZD10Q9ULW2 581 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 PPIL1Q9Y3C6 166 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 SNX10Q9Y5X0 201 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 FHOD1Q9Y613 1164 aa8.31□□□□□ -1.08
CDH13-203ENST00000431540 RP1L1Q8IWN7 2480 aaPredicted RBP8.31□□□□□ -1.08
CDH13-203ENST00000431540 TCRBV5S1A1TA0A578 114 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 TRAFD1O14545 582 aaPredicted RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 SOCS5O75159 536 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 PALMO75781 387 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 RECQL5O94762 991 aaPredicted RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 ELFN1P0C7U0 828 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 CCNB1P14635 433 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 MAP4P27816 1152 aaKnown RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 GKP32189 559 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 FASLGP48023 281 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 APBA1Q02410 837 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 BCL2L1Q07817 233 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 SRSF1Q07955 248 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDH13-203ENST00000431540 IL10RBQ08334 325 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 ILF3Q12906 894 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDH13-203ENST00000431540 NFATC3Q12968 1075 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 LRP8Q14114 963 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 C15orf59Q2T9L4 293 aaPredicted RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 ATXN7L2Q5T6C5 722 aaPredicted RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 SPECC1LQ69YQ0 1117 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 BORAQ6PGQ7 559 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 FOXR1Q6PIV2 292 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 B3GNT8Q7Z7M8 397 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 JAMLQ86YT9 394 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 EMC1Q8N766 993 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 ENOX1Q8TC92 643 aaKnown RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 GPT2Q8TD30 523 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 FNIP1Q8TF40 1166 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 USP7Q93009 1102 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 FUBP1Q96AE4 644 aaKnown RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 SH3KBP1Q96B97 665 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 WRAP53Q9BUR4 548 aaKnown RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 SLC12A9Q9BXP2 914 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 DPEP2Q9H4A9 486 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 FBXO8Q9NRD0 319 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 PISDQ9UG56 409 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 AJAP1Q9UKB5 411 aaPredicted RBP8.3□□□□□ -1.08
CDH13-203ENST00000431540 DNPEPQ9ULA0 475 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 MYO6Q9UM54 1294 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 ITM2BQ9Y287 266 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 RNF215Q9Y6U7 377 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 NBASA2RRP1 2371 aa8.3□□□□□ -1.08
CDH13-203ENST00000431540 LRRK2Q5S007 2527 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 PRAMEF33A0A0G2JMD5 474 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 PRSS38A1L453 326 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 TMEM202A6NGA9 273 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 RHPN2P1A8MT19 583 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 C9orf172C9J069 976 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 HTRA2O43464 458 aaPredicted RBP8.29□□□□□ -1.08
CDH13-203ENST00000431540 B4GAT1O43505 415 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 BUB1BO60566 1050 aaPredicted RBP8.29□□□□□ -1.08
CDH13-203ENST00000431540 PRAMEF10O60809 474 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 FGF1P05230 155 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 IVLP07476 585 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 CYP2A6P11509 494 aaPredicted RBP8.29□□□□□ -1.08
CDH13-203ENST00000431540 GZMAP12544 262 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 CHRNB2P17787 502 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 CCR10P46092 362 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 MAP7Q14244 749 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 SYCP1Q15431 976 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 CDO1Q16878 200 aa8.29□□□□□ -1.08
CDH13-203ENST00000431540 CLEC16AQ2KHT3 1053 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms