RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 POU5F1Q01860 360 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF91Q05481 1191 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ACSM2AQ08AH3 577 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 KYNUQ16719 465 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF284Q2VY69 593 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 Q4G0T1 1027 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 DCAF6Q58WW2 860 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 LRIF1Q5T3J3 769 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MFSD4BQ5TF39 518 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ACSM2BQ68CK6 577 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 PQLC2Q6ZP29 291 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 DPPA4Q7L190 304 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 YTHDF3Q7Z739 585 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 HAPLN4Q86UW8 402 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 KBTBD6Q86V97 674 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ANKRD13BQ86YJ7 626 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 CAMK1DQ8IU85 385 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 LURAP1LQ8IV03 231 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 C16orf52Q8NHV5 167 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 DUSP19Q8WTR2 217 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZKSCAN4Q969J2 545 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 RRNAD1Q96FB5 475 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZC3HAV1LQ96H79 300 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 URB1-AS1Q96HZ7 61 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 EGLN2Q96KS0 407 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 TRMOQ9BU70 441 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 C1QTNF1Q9BXJ1 281 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MAGIXQ9H6Y5 334 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MMP25Q9NPA2 562 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZBTB40Q9NUA8 1239 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 PAG1Q9NWQ8 432 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MTMR10Q9NXD2 777 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 BTBD3Q9Y2F9 522 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 WBP11Q9Y2W2 641 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 CLIC4Q9Y696 253 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 MAU2Q9Y6X3 613 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 FAM169AQ9Y6X4 670 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 HMGXB3Q12766 1538 aa3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZCCHC6Q5VYS8 1495 aaKnown RBP3.22□□□□□ -1.89
HMGB1P27-201ENST00000431429 THOC2Q8NI27 1593 aaKnown RBP3.21□□□□□ -1.89
HMGB1P27-201ENST00000431429 LY6G6EA0A0G2JKS1 128 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 I6L893 689 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 HS6ST1O60243 411 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 JRKO75564 520 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 RGS11O94810 467 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ACTN1P12814 892 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 GLULP15104 373 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 GPTP24298 496 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 HOXC9P31274 260 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 THPOP40225 353 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 METAP2P50579 478 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 MRPL12P52815 198 aaKnown RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 PPP5CP53041 499 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 GALCP54803 685 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 MFAP4P55083 255 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 TFAP4Q01664 338 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ROR1Q01973 937 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 CDC16Q13042 620 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 IKQ13123 557 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 NAE1Q13564 534 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 TNFAIP1Q13829 316 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 RASA2Q15283 850 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 TRIP6Q15654 476 aaKnown RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ODF3L2Q3SX64 289 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ERMARDQ5T6L9 678 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 GPR139Q6DWJ6 353 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 PARM1Q6UWI2 310 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC16A12Q6ZSM3 486 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 MCEMP1Q8IX19 187 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 MINDY1Q8N5J2 469 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 NEXN-AS1Q8NBZ9 246 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 AGBL3Q8NEM8 1001 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 OR14L1PQ8NHC6 308 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 GABPB2Q8TAK5 448 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARRDC2Q8TBH0 407 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM174Q8WUU8 243 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC35F5Q8WV83 523 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ABHD1Q96SE0 405 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 ACOX2Q99424 681 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 BAG1Q99933 345 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 NCAPGQ9BPX3 1015 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 IFIH1Q9BYX4 1025 aaKnown RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 TUBA8Q9NY65 449 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 CWC15Q9P013 229 aaKnown RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 MRPL15Q9P015 296 aaKnown RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 C5AR2Q9P296 337 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 HEY2Q9UBP5 337 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 UBA2Q9UBT2 640 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 CMAHPQ9Y471 501 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 RIMBP3CA6NJZ7 1639 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 RIMBP3BA6NNM3 1639 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 RIMBP3Q9UFD9 1639 aa3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 BAZ1BQ9UIG0 1483 aaKnown RBP3.21□□□□□ -1.9
HMGB1P27-201ENST00000431429 KRTAP4-8A0A0G2JLE6 195 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 A0A1W2PRQ8 180 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 LNP1A1A4G5 178 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 A8MXE2 369 aa3.2□□□□□ -1.9
HMGB1P27-201ENST00000431429 J3KR12 359 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms