RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ABCG8Q9H221 673 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 DEAF1O75398 565 aaPredicted RBP13.76□□□□□ -0.21
SGMS1-203ENST00000429490 LHX1P48742 406 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 LIPEQ05469 1076 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 TMTC4Q5T4D3 741 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 ZDHHC13Q8IUH4 622 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 CROCCP3Q8IVE0 287 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 HNRNPABQ99729 332 aaKnown RBP13.76□□□□□ -0.21
SGMS1-203ENST00000429490 CNGB3Q9NQW8 809 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 NFKBIEO00221 500 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 SOAT2O75908 522 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 COL6A2P12110 1019 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 CDK9P50750 372 aaKnown RBP13.76□□□□□ -0.21
SGMS1-203ENST00000429490 CLCN5P51795 746 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 TIGD7Q6NT04 549 aaPredicted RBP13.76□□□□□ -0.21
SGMS1-203ENST00000429490 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 CRYBG2Q8N1P7 616 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 SEMA3CQ99985 751 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 ZNF696Q9H7X3 374 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 VRTNQ9H8Y1 702 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 EXD2Q9NVH0 621 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.212e-7■■■■■ 26.8
SGMS1-203ENST00000429490 ATAD5Q96QE3 1844 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 KIF13BQ9NQT8 1826 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 PPP6CO00743 305 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ZNF195O14628 629 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 FFAR3O14843 346 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 GPR42O15529 346 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 TREHO43280 583 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 FKBP9O95302 570 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 HLA-DQB2P05538 268 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ADSLP30566 484 aaPredicted RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 CLCNKBP51801 687 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 VAC14Q08AM6 782 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 PAFAH1B3Q15102 231 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 CYS1Q717R9 158 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 FKBP9P1Q75LS8 142 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 GAB3Q8WWW8 586 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ALG2Q9H553 416 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 BPIFA1Q9NP55 256 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SMOXQ9NWM0 555 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 RNF181Q9P0P0 153 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 BLOC1S6Q9UL45 172 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 LINC00854A0A1B0GVQ3 168 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SH3BP5O60239 455 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SMIM10L2AP0DMW4 78 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SMIM10L2BP0DMW5 78 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SLC2A4P14672 509 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 DIO3P55073 304 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 RAD51Q06609 339 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 RGS21Q2M5E4 152 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 BNIPLQ7Z465 357 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 CIR1Q86X95 450 aaPredicted RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 FIBCD1Q8N539 461 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ISOC1Q96CN7 298 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 NSUN5Q96P11 429 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 RIC8BQ9NVN3 520 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SMPD3Q9NY59 655 aaPredicted RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 KIF17Q9P2E2 1029 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SUCOQ9UBS9 1254 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 PCDHGA7Q9Y5G6 932 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 H3BNH8 94 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ZNF682O95780 498 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 FCGR1AP12314 374 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 CLK1P49759 484 aaKnown RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ZNF280AP59817 542 aaPredicted RBP13.75□□□□□ -0.21
SGMS1-203ENST00000429490 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SFRP1Q8N474 314 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 ITFG2Q969R8 447 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
SGMS1-203ENST00000429490 CENPFP49454 3210 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 DCLK1O15075 740 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 NPHS1O60500 1241 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 CYP4B1P13584 511 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 MTPNP58546 118 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 DAB2P98082 770 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 OVOS1Q6IE37 1185 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 PLD3Q8IV08 490 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 OSCP1Q8WVF1 389 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 CENPNQ96H22 339 aaPredicted RBP13.74□□□□□ -0.21
SGMS1-203ENST00000429490 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 RUBCNLQ9H714 662 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 SLC38A7Q9NVC3 462 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 ZNFX1Q9P2E3 1918 aaKnown RBP13.74□□□□□ -0.21
SGMS1-203ENST00000429490 SBF2Q86WG5 1849 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 B4GAT1O43505 415 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 NOBOXO60393 691 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
SGMS1-203ENST00000429490 ESRRBO95718 433 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms