RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 KCNA5P22460 613 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 NFKBIAP25963 317 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 MAGEA6P43360 314 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 CCL23P55773 120 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 USP46P62068 366 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 DPYSQ14117 519 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 PLCL1Q15111 1095 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 CYP51A1Q16850 503 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 TSPAN17Q96FV3 270 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 GLT1D1Q96MS3 346 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 VAT1Q99536 393 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 GPR22Q99680 433 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 MRPL57Q9BQC6 102 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 HAUS8Q9BT25 410 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ADAMTS10Q9H324 1103 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 BPIFA1Q9NP55 256 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 TMEM30AQ9NV96 361 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 AFF4Q9UHB7 1163 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 RNF112Q9ULX5 631 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ANKRD6Q9Y2G4 727 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 MTF2Q9Y483 593 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 HEMK1Q9Y5R4 338 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 MAGED1Q9Y5V3 778 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 PTPRZ1P23471 2315 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 CROCCQ5TZA2 2017 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SLC12A8A0AV02 714 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 POM121CA8CG34 1229 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 A8MX80 341 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 PTGESO14684 152 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 GRID2O43424 1007 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 NDUFS3O75489 264 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 IPO13O94829 963 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 RECKO95980 971 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 HGFP14210 728 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 HADHAP40939 763 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 CDC42EP1Q00587 391 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SLC10A7Q0GE19 358 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 METTL21CQ5VZV1 264 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 REP15Q6BDI9 236 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 IQSEC1Q6DN90 963 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ZFP1Q6P2D0 407 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 PAQR9Q6ZVX9 377 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 NEK10Q6ZWH5 1172 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 DEFB128Q7Z7B8 93 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 CENPLQ8N0S6 344 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 NAT16Q8N8M0 369 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 MAGEE2Q8TD90 523 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 CANT1Q8WVQ1 401 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 CASP10Q92851 521 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 NCLNQ969V3 563 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 THAP11Q96EK4 314 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 RMND5BQ96G75 393 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 KLHL32Q96NJ5 620 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SEMA3CQ99985 751 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SPAG4Q9NPE6 437 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 STARD7Q9NQZ5 370 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 AASDHPPTQ9NRN7 309 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 DERAQ9Y315 318 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 VWA7Q9Y334 891 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ASB3Q9Y575 518 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 COMMD3-BMI1R4GMX3 469 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 A0A1W2PQH9 124 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ARL5CA6NH57 179 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 H3BMM5 538 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 UBXN8O00124 270 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 PPP6CO00743 305 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 PSMD3O43242 534 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 NRP2O60462 931 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 GPR32O75388 356 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 GLP2RO95838 553 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 GABRB3P28472 473 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 OR1E1P30953 314 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 GRIA2P42262 883 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 SLC5A3P53794 718 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CDKL1Q00532 357 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 TWF1Q12792 350 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 FSCN1Q16658 493 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 ZRANB3Q5FWF4 1079 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 HECTD2Q5U5R9 776 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 B3GNT6Q6ZMB0 384 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 C14orf80Q86SX3 495 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 KBTBD6Q86V97 674 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ABI1Q8IZP0 508 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 C3orf58Q8NDZ4 430 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CALML6Q8TD86 181 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 EZH1Q92800 747 aaPredicted RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 PSMG2Q969U7 264 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 VPS33AQ96AX1 596 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 DGCR14Q96DF8 476 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 ADAM2Q99965 735 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 SOX17Q9H6I2 414 aaPredicted RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 WDR6Q9NNW5 1121 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 ENTPD7Q9NQZ7 604 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CD274Q9NZQ7 290 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 LMCD1Q9NZU5 365 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 TCAF1Q9Y4C2 921 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ANGPTL3Q9Y5C1 460 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 A0A0J9YYE9 177 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 SMIM35A0A1B0GVV1 85 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms