RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 NOL6Q9H6R4 1146 aaKnown RBP12.8□□□□□ -0.36
LDB3-205ENST00000429277 ZFP14Q9HCL3 533 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 SSR3Q9UNL2 185 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 LOC100506127A0A0U1RQW1 187 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 SH3BGRLO75368 114 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 DPYSQ14117 519 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 DGCR6Q14129 220 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 NOMO1Q15155 1222 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 NDUFA9Q16795 377 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 ATP13A5Q4VNC0 1218 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 DNAJB14Q8TBM8 379 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 HDAC10Q969S8 669 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 BTBD9Q96Q07 612 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 PCDH18Q9HCL0 1135 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 UBAP1Q9NZ09 502 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 PER2O15055 1255 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 LRIG2O94898 1065 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 SEC24AO95486 1093 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 SLC26A3P40879 764 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 ADARP55265 1226 aaKnown RBP12.8□□□□□ -0.36
LDB3-205ENST00000429277 SPIBQ01892 262 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 DDR1Q08345 913 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 OAFQ86UD1 273 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 COPS5Q92905 334 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 FAXDC2Q96IV6 333 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 CCDC28BQ9BUN5 200 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 ZDHHC4Q9NPG8 344 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 GPN3Q9UHW5 284 aaPredicted RBP12.8□□□□□ -0.36
LDB3-205ENST00000429277 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.8□□□□□ -0.36
LDB3-205ENST00000429277 CD52P31358 61 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 SLC25A3Q00325 362 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 TTMPQ5BVD1 217 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 CACUL1Q86Y37 369 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 TMC8Q8IU68 726 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 PHYKPLQ8IUZ5 450 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 ZFPM1Q8IX07 1006 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 LEMD2Q8NC56 503 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 FAM86C2PA6NEL3 165 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 RAB25P57735 213 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 NRF1Q16656 503 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 NDNQ99608 321 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TBC1D10AQ9BXI6 508 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 SMURF2Q9HAU4 748 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 ATG13O75143 517 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 IGFBP4P22692 258 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 PDK3Q15120 406 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TEX44Q53QW1 395 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 FBXO42Q6P3S6 717 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 UBE2R2Q712K3 238 aaPredicted RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 ZHX1-C8orf76Q96EF9 292 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 MCRS1Q96EZ8 462 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 P2RY11Q96G91 374 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 MTRRQ9UBK8 725 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TCRBV9S1A1TA0A576 114 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 CCDC182A6NF36 153 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 UGT2B11O75310 529 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 WFS1O76024 890 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 NFATC1O95644 943 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 APODP05090 189 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 RHOQP17081 205 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 CRADDP78560 199 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 ABRQ12979 859 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 QPRTQ15274 297 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 RAVER1Q8IY67 606 aaKnown RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 GPR135Q8IZ08 494 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 OMA1Q96E52 524 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 SLC9A7Q96T83 725 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 GRIP2Q9C0E4 1043 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 RSPH9Q9H1X1 276 aaPredicted RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 CRISPLD1Q9H336 500 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 PCDHB9Q9Y5E1 797 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 ADRA1BP35368 520 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TNFSF9P41273 254 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 OMPP47874 163 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 ACLYP53396 1101 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TRIM32Q13049 653 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 CPTPQ5TA50 214 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 EPB41L1Q9H4G0 881 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 BPIFA1Q9NP55 256 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 DNAJC11Q9NVH1 559 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TRAF6Q9Y4K3 522 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 N6AMT1Q9Y5N5 214 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 COMMD3-BMI1R4GMX3 469 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 PAGE1O75459 146 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 ERAL1O75616 437 aaKnown RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 ANPEPP15144 967 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms