RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 CSRP2Q16527 193 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 WSCD2Q2TBF2 565 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 GCNT7Q6ZNI0 430 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 DENND6BQ8NEG7 585 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 ZNF592Q92610 1267 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 LRRC45Q96CN5 670 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 DDX47Q9H0S4 455 aaKnown RBP22.34■■□□□ 1.17
PTPN18-205ENST00000428843 LRRC40Q9H9A6 602 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 CAPN10Q9HC96 672 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 FSCN3Q9NQT6 498 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 MBNL1Q9NR56 388 aaKnown RBP22.34■■□□□ 1.17
PTPN18-205ENST00000428843 SLC6A14Q9UN76 642 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 ZNF711Q9Y462 761 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 SPO11Q9Y5K1 396 aa22.34■■□□□ 1.17
PTPN18-205ENST00000428843 TP53BP1Q12888 1972 aaPredicted RBP22.33■■□□□ 1.17
PTPN18-205ENST00000428843 PCDH15Q96QU1 1955 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 H0Y8X5 98 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 USP12O75317 370 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 KRT14P02533 472 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 TUBB4AP04350 444 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 IGFALSP35858 605 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 STC1P52823 247 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 SEMA5AQ13591 1074 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 LRRC14Q15048 493 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 IRF4Q15306 451 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 LYSMD3Q7Z3D4 306 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 MFSD2AQ8NA29 543 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 GRK7Q8WTQ7 553 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 BMFQ96LC9 184 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 NUSAP1Q9BXS6 441 aaKnown RBP22.33■■□□□ 1.17
PTPN18-205ENST00000428843 SHOC2Q9UQ13 582 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 HS3ST3A1Q9Y663 406 aa22.33■■□□□ 1.17
PTPN18-205ENST00000428843 A0A1B0GVT2 93 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 POM121BA6NF01 834 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 KIF2AO00139 706 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-205ENST00000428843 FPGTO14772 594 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 VILLO15195 856 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 ETV3P41162 512 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 VPS41P49754 854 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 DENND5AQ6IQ26 1287 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 KDM7AQ6ZMT4 941 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 RFLNAQ6ZTI6 216 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 Q6ZVL8 140 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 TECPR1Q7Z6L1 1165 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 ABI3BPQ7Z7G0 1075 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 NUS1Q96E22 293 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 DTD2Q96FN9 168 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 SRPK1Q96SB4 655 aaKnown RBP22.32■■□□□ 1.16
PTPN18-205ENST00000428843 ZFYVE1Q9HBF4 777 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 ARNT2Q9HBZ2 717 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 FEZ2Q9UHY8 353 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-205ENST00000428843 NEU2Q9Y3R4 380 aa22.32■■□□□ 1.16
PTPN18-205ENST00000428843 ERI2A8K979 691 aaKnown RBP22.31■■□□□ 1.16
PTPN18-205ENST00000428843 E7EVH7 732 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 CCDC188H7C350 402 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 LMAN1P49257 510 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 BASP1P80723 227 aaKnown RBP22.31■■□□□ 1.16
PTPN18-205ENST00000428843 BNC1Q01954 994 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 KYAT3Q6YP21 454 aaKnown RBP22.31■■□□□ 1.16
PTPN18-205ENST00000428843 PRR23CQ6ZRP0 262 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 IQCHQ86VS3 1027 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 KLHL7Q8IXQ5 586 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 CCHCR1Q8TD31 782 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 BLOC1S5Q8TDH9 187 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 EID2BQ96D98 161 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 GPR63Q9BZJ6 419 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 PCYOX1Q9UHG3 505 aa22.31■■□□□ 1.16
PTPN18-205ENST00000428843 A6NNZ2 444 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 AURKAO14965 403 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 URI1O94763 535 aaPredicted RBP22.3■■□□□ 1.16
PTPN18-205ENST00000428843 ECEL1O95672 775 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 SLC4A1P02730 911 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 PCCBP05166 539 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 C21orf59P57076 290 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 GRIK2Q13002 908 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 GPS1Q13098 491 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 TMC3Q7Z5M5 1100 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 PTAR1Q7Z6K3 402 aaPredicted RBP22.3■■□□□ 1.16
PTPN18-205ENST00000428843 OR13H1Q8NG92 308 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 SKA1Q96BD8 255 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 KLHDC7BQ96G42 594 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 TRABDQ9H4I3 376 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 KCTD5Q9NXV2 234 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 HACD3Q9P035 362 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 CD84Q9UIB8 345 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 ANKRD6Q9Y2G4 727 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 SCN8AQ9UQD0 1980 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 CACNA1EQ15878 2313 aa22.3■■□□□ 1.16
PTPN18-205ENST00000428843 TMEM131Q92545 1883 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.29■■□□□ 1.16
PTPN18-205ENST00000428843 LNP1A1A4G5 178 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 TLR4O00206 839 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 ARHGAP33O14559 1287 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 SUN1O94901 812 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 GAS8O95995 478 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 APRTP07741 180 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 THEGLP0DJG4 465 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 ENGP17813 658 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 PTGIRP43119 386 aa22.29■■□□□ 1.16
PTPN18-205ENST00000428843 SPINT3P49223 89 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms