RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ATP13A2Q9NQ11 1180 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 IL37Q9NZH6 218 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 EGFL7Q9UHF1 273 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 OSGIN1Q9UJX0 560 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 NDUFAF1Q9Y375 327 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 SIPA1L1O43166 1804 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 AXIN1O15169 862 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 TBX1O43435 398 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 GALNT3Q14435 633 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 STRADAQ7RTN6 431 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 PIWIL4Q7Z3Z4 852 aaKnown RBP16.11■□□□□ 0.17
C9orf3-206ENST00000428313 P2RY8Q86VZ1 359 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 SMG8Q8ND04 991 aaKnown RBP16.11■□□□□ 0.17
C9orf3-206ENST00000428313 GIPC2Q8TF65 315 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 FAR1Q8WVX9 515 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 ATXN7L3BQ96GX2 97 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 ASB2Q96Q27 587 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 GDF15Q99988 308 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 AIFM2Q9BRQ8 373 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 ALOXE3Q9BYJ1 711 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 MMP27Q9H306 513 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 TLK1Q9UKI8 766 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 DLX3O60479 287 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 HTR3AP46098 478 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 NR2C2P49116 596 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 MYL6P60660 151 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 FOXM1Q08050 763 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 CRY1Q16526 586 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 ANO4Q32M45 955 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 ZIK1Q3SY52 487 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 YIF1BQ5BJH7 314 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 PNCKQ6P2M8 343 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 PTRH1Q86Y79 214 aaKnown RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 SCYL1Q96KG9 808 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 ADPGKQ9BRR6 497 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 MCMBPQ9BTE3 642 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 DTLQ9NZJ0 730 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 MRPL11Q9Y3B7 192 aaKnown RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 ZFC3H1O60293 1989 aaKnown RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 A0A0A0MRY4 1105 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 AGAP5A6NIR3 686 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 MAP3K6O95382 1288 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 CCNE2O96020 404 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 ALPLP05186 524 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 SEPHS1P49903 392 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 DEFA1P59665 94 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 DEFA3P59666 94 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 TYSND1Q2T9J0 566 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 HEATR6Q6AI08 1181 aaKnown RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 RETREG3Q86VR2 466 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 UBQLNLQ8IYU4 475 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 MCFD2Q8NI22 146 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 PEX13Q92968 403 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 NXNL1Q96CM4 212 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 TBCBQ99426 244 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 SLC30A3Q99726 388 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF717Q9BY31 904 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-206ENST00000428313 SYTL2Q9HCH5 934 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 KIAA1257Q9ULG3 409 aa16.1■□□□□ 0.17
C9orf3-206ENST00000428313 PABPN1LA6NDY0 278 aaKnown RBP16.09■□□□□ 0.17
C9orf3-206ENST00000428313 INPP4BO15327 924 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 SOAT2O75908 522 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 APOA1P02647 267 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 OR3A3P47888 321 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 AP2S1P53680 142 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-206ENST00000428313 OR2B6P58173 313 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 VBP1P61758 197 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 IMPG1Q17R60 797 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 BEND5Q7L4P6 421 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 GLRX5Q86SX6 157 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 METTL4Q8N3J2 472 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 CCDC185Q8N715 623 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 RORBQ92753 470 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 DPF3Q92784 378 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 MAP6Q96JE9 813 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 FEM1AQ9BSK4 669 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 SLC7A5P2Q9GIP4 190 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 CMTM6Q9NX76 183 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 GTSE1Q9NYZ3 720 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 GRIP1Q9Y3R0 1128 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 PCDHB3Q9Y5E6 796 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 A3GALT2U3KPV4 340 aa16.09■□□□□ 0.17
C9orf3-206ENST00000428313 TEX51A0A1B0GUA7 166 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 SNTNA6NMZ2 147 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 TRAPPC2P0DI81 140 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 TRAPPC2BP0DI82 140 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 DNAJB13P59910 316 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF45Q02386 682 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 TARDBPQ13148 414 aaKnown RBP eCLIP16.08■□□□□ 0.17
C9orf3-206ENST00000428313 TJAP1Q5JTD0 557 aa16.08■□□□□ 0.17
C9orf3-206ENST00000428313 SLFN12LQ6IEE8 588 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms