RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ACTR3P61158 418 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 DPYSL3Q14195 570 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 TPGS2Q68CL5 300 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF605Q86T29 641 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 TMC8Q8IU68 726 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 LINGO1Q96FE5 620 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 RIBC2Q9H4K1 309 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CD84Q9UIB8 345 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CHKBQ9Y259 395 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 A0A1B0GVM2 712 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 TCAF2A6NFQ2 919 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC38A8A6NNN8 435 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC28A2O43868 658 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 GLI1P08151 1106 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 PIM1P11309 404 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ERCC2P18074 760 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 FASP25445 335 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 PIK3R1P27986 724 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SERPINB1P30740 379 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CDH4P55283 916 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 NR1D2Q14995 579 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CPSF6Q16630 551 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 DUPD1Q68J44 220 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 EIF3MQ7L2H7 374 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 TMPRSS11BQ86T26 416 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ACTRT1Q8TDG2 376 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SHC3Q92529 594 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 MAGEB18Q96M61 343 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ZIM3Q96PE6 472 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC38A2Q96QD8 506 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF607Q96SK3 696 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 BTBD1Q9H0C5 482 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 EQTNQ9NQ60 294 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 DDX18Q9NVP1 670 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ITGAVP06756 1048 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 GSTM5P46439 218 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 GNPDA1P46926 289 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 IRAK1P51617 712 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 KRR1Q13601 381 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 HECTD2Q5U5R9 776 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ENPP7Q6UWV6 458 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 LINGO4Q6UY18 593 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 FAM98AQ8NCA5 519 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ITFG1Q8TB96 612 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SH3RF2Q8TEC5 729 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 NDNQ99608 321 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 SGK2Q9HBY8 427 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ZFP37Q9Y6Q3 630 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 WTIPA6NIX2 430 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 H7C0S8 307 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 XKRYO14609 159 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 MEIS2O14770 477 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ADRB2P07550 413 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ACTR1BP42025 376 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 PSMD4P55036 377 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CORO7P57737 925 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ACTR1AP61163 376 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 RPL38P63173 70 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CCL14Q16627 93 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CFAP206Q8IYR0 622 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CELF5Q8N6W0 485 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 KYQ8NBH2 561 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ZCCHC10Q8TBK6 192 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CASKIN2Q8WXE0 1202 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 RNF145Q96MT1 663 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 FNDC11Q9BVV2 318 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 OSER1Q9NX31 292 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 GTF2IRD1Q9UHL9 959 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 TAGLN3Q9UI15 199 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 CDC14AQ9UNH5 594 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 RAI2Q9Y5P3 530 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 ADAMTSL3P82987 1691 aa9.95□□□□□ -0.82
CLTCL1-202ENST00000427926 TMEM150CB9EJG8 249 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CLEC3AO75596 197 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 C22orf31O95567 290 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 PRLRP16471 622 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CYP3A5P20815 502 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CDH5P33151 784 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CDK16Q00536 496 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 FRG1Q14331 258 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 NDUFAF6Q330K2 333 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 UBXN11Q5T124 520 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TRIM40Q6P9F5 258 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TXNDC11Q6PKC3 985 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 NPNTQ6UXI9 565 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ATCAYQ86WG3 371 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 UBR7Q8N806 425 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 SEC16BQ96JE7 1060 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 PRDM12Q9H4Q4 367 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 KCNMB3Q9NPA1 279 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TBC1D23Q9NUY8 699 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 PSMD13Q9UNM6 376 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 A6NCN8 305 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 INPPL1O15357 1258 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 SMNDC1O75940 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TNFP01375 233 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 MSL3P1P0C860 447 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 KCNA5P22460 613 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TARSP26639 723 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 MLLT3P42568 568 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms