RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 C10orf76Q5T2E6 689 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 ALS2CLQ60I27 953 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 HAUS3Q68CZ6 603 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 JMJD6Q6NYC1 403 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 COLCA1Q6ZS62 124 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 ARMC9Q7Z3E5 817 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 CACNA2D4Q7Z3S7 1137 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 MAATS1Q7Z4T9 603 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 VPS36Q86VN1 386 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 ZNF444Q8N0Y2 327 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 GUF1Q8N442 669 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 ARFGAP2Q8N6H7 521 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 EIF1ADQ8N9N8 165 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 NOA1Q8NC60 698 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 NAXEQ8NCW5 288 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 OR1N1Q8NGS0 311 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 MBD3L2Q8NHZ7 208 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 AENQ8WTP8 325 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 RSC1A1Q92681 617 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SYN2Q92777 582 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 ZBTB45Q96K62 511 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 PPM1MQ96MI6 270 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TRMOQ9BU70 441 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SNX15Q9NRS6 342 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TMOD4Q9NZQ9 345 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 PDP2Q9P2J9 529 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TTC3P53804 2025 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SPATA31A1Q5TZJ5 1347 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 ZNF646O15015 1829 aaPredicted RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 ZNFX1Q9P2E3 1918 aaKnown RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 NOTCH4Q99466 2003 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 ADAMTSL1Q8N6G6 1762 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 MACROD2A1Z1Q3 448 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 LRRIQ3A6PVS8 624 aaPredicted RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 EBAG9O00559 213 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 SPRY2O43597 315 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 ASNA1O43681 348 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 CCNT1O60563 726 aaKnown RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 RNASEH2AO75792 299 aaKnown RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 PYGLP06737 847 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 EPHA3P29320 983 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 CASP1P29466 404 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 PRKAR1BP31321 381 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 GATMP50440 423 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 PGDP52209 483 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 PNLIPRP1P54315 467 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 DYNLL1P63167 89 aaKnown RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 KCTD2Q14681 263 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 CALCRLQ16602 461 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 INTS11Q5TA45 600 aaKnown RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 C12orf60Q5U649 245 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 KRT79Q5XKE5 535 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 DENND2CQ68D51 928 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 CENPPQ6IPU0 288 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 WDR59Q6PJI9 974 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 B4GALNT4Q76KP1 1039 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 TADA2BQ86TJ2 420 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 IFT20Q8IY31 132 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 MREGQ8N565 214 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 C4orf32Q8N8J7 132 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 SUN3Q8TAQ9 357 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 TBC1D22AQ8WUA7 517 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 WDYHV1Q96HA8 205 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 FAM84BQ96KN1 310 aaPredicted RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 CAPZA3Q96KX2 299 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 UBXN10Q96LJ8 280 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 SORBS1Q9BX66 1292 aaKnown RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 VN1R3Q9BXE9 311 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 TP63Q9H3D4 680 aaPredicted RBP5.25□□□□□ -1.57
LINC00458-202ENST00000427299 LRFN1Q9P244 771 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 MAD2L2Q9UI95 211 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 RIMKLBQ9ULI2 386 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 ANKRD31Q8N7Z5 1873 aa5.25□□□□□ -1.57
LINC00458-202ENST00000427299 UBE4BO95155 1302 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 PRSS47A8MTI9 375 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 BTNL10A8MVZ5 291 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 KLRF2D3W0D1 207 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 IPO5O00410 1097 aaKnown RBP5.24□□□□□ -1.57
LINC00458-202ENST00000427299 EIF3HO15372 352 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC00458-202ENST00000427299 TIMM44O43615 452 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 SERPING1P05155 500 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 DHRS4L1P0CG22 281 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 TNFRSF1BP20333 461 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 HMGB2P26583 209 aaKnown RBP5.24□□□□□ -1.57
LINC00458-202ENST00000427299 NTSR1P30989 418 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 FKBP3Q00688 224 aaKnown RBP5.24□□□□□ -1.57
LINC00458-202ENST00000427299 TFAP4Q01664 338 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 C2orf54Q08AI8 447 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 CUL1Q13616 776 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 PDIA5Q14554 519 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 CLCA4Q14CN2 919 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 ACOX1Q15067 660 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 LETM2Q2VYF4 491 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 TRIM60Q495X7 471 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 CCDC40Q4G0X9 1142 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 SLC10A5Q5PT55 438 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 SFMBT2Q5VUG0 894 aa5.24□□□□□ -1.57
LINC00458-202ENST00000427299 C15orf52Q6ZUT6 534 aaKnown RBP5.24□□□□□ -1.57
LINC00458-202ENST00000427299 UBE2Q1Q7Z7E8 422 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms