RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CTDNEP1O95476 244 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SMARCB1Q12824 385 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 PACS2Q86VP3 889 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 RASAL3Q86YV0 1011 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF548Q8NEK5 533 aaPredicted RBP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 PPCDCQ96CD2 204 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 COMMD4Q9H0A8 199 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 DEFB129Q9H1M3 183 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 GPATCH2LQ9NWQ4 482 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 BCKDKO14874 412 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SLC22A2O15244 555 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CTSKP43235 329 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 PQLC1Q8N2U9 271 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 ZC3H10Q96K80 434 aaKnown RBP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SPACA7Q96KW9 195 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 ASB8Q9H765 288 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 PLEKHA1Q9HB21 404 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 A0A1W2PQ67 120 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CYP1A2P05177 515 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CXCL8P10145 99 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 KELP23276 732 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 DDR1Q08345 913 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 LAPTM5Q13571 262 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 APTXQ7Z2E3 356 aaKnown RBP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 IQCF2Q8IXL9 164 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SOCS4Q8WXH5 440 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 ACSS3Q9H6R3 686 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CCNB1P14635 433 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 DNAJB8Q8NHS0 232 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SPATA20Q8TB22 786 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 TLR10Q9BXR5 811 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SLC28A2O43868 658 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 RB1P06400 928 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CLCN3P51790 818 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 IFI35P80217 286 aaPredicted RBP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 OR2L5Q8NG80 312 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 AGAP11Q8TF27 550 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SLC4A5Q9BY07 1137 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 CALML5Q9NZT1 146 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 ADAM8P78325 824 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 FNBP1LQ5T0N5 605 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 GRHL2Q6ISB3 625 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 SNX20Q7Z614 316 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 C12orf56Q8IXR9 622 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 RNF148Q8N7C7 305 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 HJURPQ8NCD3 748 aaPredicted RBP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 COL26A1Q96A83 441 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 IFT46Q9NQC8 304 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 OR12D3Q9UGF7 316 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 PCDHGA3Q9Y5H0 932 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 STOMP27105 288 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 ALDH4A1P30038 563 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PRKCIP41743 596 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 GRIK4Q16099 956 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 SWT1Q5T5J6 900 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PAMR1Q6UXH9 720 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 THAP5Q7Z6K1 395 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 DNAJB14Q8TBM8 379 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 IFNA7P01567 189 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 RLN2P04090 185 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 AMD1P17707 334 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CYP4F2P78329 520 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CYP4F3Q08477 520 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 BAP1Q92560 729 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CELF6Q96J87 481 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 DDX3YO15523 660 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 GPIP06744 558 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 KLRC2P26717 231 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 TIE1P35590 1138 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 RPL38P63173 70 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PPP2R2BQ00005 443 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF730Q6ZMV8 503 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CPNE2Q96FN4 548 aaPredicted RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 GPN3Q9UHW5 284 aaPredicted RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 DEF8Q6ZN54 512 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 OR2T34Q8NGX1 318 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 OR2T3Q8NH03 318 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 RNF31Q96EP0 1072 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 TMEM134Q9H6X4 195 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 STARD7Q9NQZ5 370 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CNTNAP4Q9C0A0 1308 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 H3BRB1 525 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 ENDOD1O94919 500 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PAPSS2O95340 614 aaPredicted RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 C9P02748 559 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CD44P16070 742 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 LPOP22079 712 aaPredicted RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 HOXC12P31275 282 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 NAGLUP54802 743 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 SIX5Q8N196 739 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 TUT1Q9H6E5 874 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 KCNQ5Q9NR82 932 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PCDHGB7Q9Y5F8 929 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 KPNA3O00505 521 aaPredicted RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PLK1P53350 603 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PTPN5P54829 565 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms