RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 PCDH12Q9NPG4 1184 aa7.09□□□□□ -1.27
CHCHD3P1-201ENST00000425516 DYRK4Q9NR20 520 aa7.09□□□□□ -1.27
CHCHD3P1-201ENST00000425516 SCHIP1Q9P0W5 487 aaPredicted RBP7.09□□□□□ -1.27
CHCHD3P1-201ENST00000425516 GGT7Q9UJ14 662 aa7.09□□□□□ -1.27
CHCHD3P1-201ENST00000425516 ITM2BQ9Y287 266 aa7.09□□□□□ -1.27
CHCHD3P1-201ENST00000425516 VPS13AQ96RL7 3174 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ANKRD36A6QL64 1941 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3DA0A087WVF3 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3IA0A087WXS9 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3EA0A087X179 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3KA0A087X1G2 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TCRBV7S3A2A0A539 114 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3FA6NER0 549 aaPredicted RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 NPIPB15A6NHN6 443 aaPredicted RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ERI2A8K979 691 aaKnown RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 METTL12A8MUP2 240 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3LB9A6J9 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TP73O15350 636 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TTI1O43156 1089 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 RAD51CO43502 376 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 LATO43561 262 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TSPAN6O43657 245 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 RPP40O75818 363 aaKnown RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ECEL1O95672 775 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 SEMA4FO95754 770 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 IGHV4-34P06331 123 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ALPIP09923 528 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3HP0C7X1 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CTPS1P17812 591 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GM2AP17900 193 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 HLA-DPA1P20036 260 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CA4P22748 312 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 LHCGRP22888 699 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GRIA1P42261 906 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GRIA4P48058 902 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CCR5P51681 352 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CDK16Q00536 496 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CREB5Q02930 508 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CKAP4Q07065 602 aaKnown RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 C2orf54Q08AI8 447 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CCDC15Q0P6D6 951 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ELP6Q0PNE2 266 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GPS1Q13098 491 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 FGL2Q14314 439 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GALNT3Q14435 633 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 SPARCL1Q14515 664 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 PRPSAP1Q14558 356 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 NUMA1Q14980 2115 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 PCSK7Q16549 785 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 PLK5Q496M5 336 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 LRRC73Q5JTD7 316 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 SIRPB2Q5JXA9 342 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ANKRD22Q5VYY1 191 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3GQ6DHY5 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3CQ6IPX1 549 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CRTC1Q6UUV9 634 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 LIPIQ6XZB0 460 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 SLC36A4Q6YBV0 504 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 DPPA4Q7L190 304 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 KDELC2Q7Z4H8 507 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 FAM124AQ86V42 546 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TRIM69Q86WT6 500 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 JAMLQ86YT9 394 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 SLC41A1Q8IVJ1 513 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TBC1D3Q8IZP1 549 aaPredicted RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 MMGT1Q8N4V1 131 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 TAB3Q8N5C8 712 aaPredicted RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 NAT8LQ8N9F0 302 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 IPMKQ8NFU5 416 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 OR14C36Q8NHC7 312 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GANCQ8TET4 914 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 PDCD6IPQ8WUM4 868 aaKnown RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CPT1BQ92523 772 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 EID2BQ96D98 161 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 FICDQ9BVA6 458 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GPR174Q9BXC1 333 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 ADGRE3Q9BY15 652 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 EBF2Q9HAK2 575 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 MAGEE1Q9HCI5 957 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CASS4Q9NQ75 786 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 EIF2B3Q9NR50 452 aaKnown RBP7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 B4GALT6Q9UBX8 382 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 SPO11Q9Y5K1 396 aa7.08□□□□□ -1.28
CHCHD3P1-201ENST00000425516 FANCMQ8IYD8 2048 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 A0A0U1RQS6 177 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 A0A1W2PQU0 124 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GOLGA6CA6NDK9 693 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 GOLGA6BA6NDN3 693 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 IGLON5A6NGN9 336 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CAPN8A6NHC0 703 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 LRRC72A6NJI9 287 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 CDK2AP1O14519 115 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 DNALI1O14645 258 aaPredicted RBP7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 MMP20O60882 483 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 RNGTTO60942 597 aaKnown RBP7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 USP12O75317 370 aa7.07□□□□□ -1.28
CHCHD3P1-201ENST00000425516 HEXIM1O94992 359 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms