RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PLD1Q13393 1074 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 RBBP7Q16576 425 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 DNAJC14Q6Y2X3 702 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 SPPL2BQ8TCT7 592 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 WBP2Q969T9 261 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 APOL5Q9BWW9 433 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 NOL11Q9H8H0 719 aaKnown RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 ZMYM5Q9UJ78 669 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 RNF112Q9ULX5 631 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 M0QZQ0 153 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 PDLIM1O00151 329 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 PIP5K1BO14986 540 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 CLIC3O95833 236 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 SLC6A4P31645 630 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 STX1BP61266 288 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 MGAT3Q09327 533 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 OR4D1Q15615 310 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 KDELC1Q6UW63 502 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 GLT6D1Q7Z4J2 308 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 RNF180Q86T96 592 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 IRGQQ8WZA9 623 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 LPGAT1Q92604 370 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 GPR21Q99679 349 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 CINPQ9BW66 212 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 TRIM4Q9C037 500 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 TCAF2A6NFQ2 919 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 SERPINF2P08697 491 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 GJA1P17302 382 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 ADRA1AP35348 466 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 SLC11A1P49279 550 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 HNRNPDQ14103 355 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TLR1Q15399 786 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 AAK1Q2M2I8 961 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 NADSYN1Q6IA69 706 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 LZTR1Q8N653 840 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 MYLIPQ8WY64 445 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 ZBTB26Q9HCK0 441 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TREX1Q9NSU2 369 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 FKBPLQ9UIM3 349 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 K7ERQ8 282 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 RNASEH2AO75792 299 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 S1PR4O95977 384 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 APOA4P06727 396 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 ALPIP09923 528 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 HGFP14210 728 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 POU4F1Q01851 419 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 PPP1R8Q12972 351 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 NFE2Q16621 373 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TECRLQ5HYJ1 363 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 ZNF549Q6P9A3 640 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TPGS1Q6ZTW0 290 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 CLDN19Q8N6F1 224 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 CDYL2Q8N8U2 506 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 IMP4Q96G21 291 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 SLC30A3Q99726 388 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 POLR1EQ9GZS1 481 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TLR8Q9NR97 1041 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 SORCS3Q9UPU3 1222 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TLR6Q9Y2C9 796 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 FCF1Q9Y324 198 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 PCDHB9Q9Y5E1 797 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 E5RI56 91 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 MMP2P08253 660 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TACR2P21452 398 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 MAGEA12P43365 314 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 RAB27AP51159 221 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 TMCO4Q5TGY1 634 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 PGM2L1Q6PCE3 622 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 PIWIL4Q7Z3Z4 852 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 MTFMTQ96DP5 389 aaKnown RBP13.35□□□□□ -0.27
MCF2L-213ENST00000421756 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 FBXO44Q9H4M3 255 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 CAAP1Q9H8G2 361 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 AKTIPQ9H8T0 292 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 THEGQ9P2T0 379 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 ANKRD6Q9Y2G4 727 aa13.35□□□□□ -0.27
MCF2L-213ENST00000421756 PRORSD1PA6NEY8 169 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 H3BNX3 289 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 PSMD3O43242 534 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 ZNF623O75123 536 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 MTHFD1P11586 935 aaKnown RBP13.34□□□□□ -0.27
MCF2L-213ENST00000421756 MAPK10P53779 464 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-213ENST00000421756 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
MCF2L-213ENST00000421756 PDSS2Q86YH6 399 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms